Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02016 ATGTCGTTGGGAATTCTTCGATCGCGAGCGGTTTCTTTCGCATCGAAGCGATTCCTCTGCACCAATGCGGCTTCCGctcctcttccccctcctccctccgccacctctccCAGCCGCTGGAACTTCCTTAAATACGCCGTCGCCGCCGCCCTCACCGGAGGCACTGGCCTCGCCGGTTACGCATCTTACGCTTACAGCTTGGAAGAAATAGATGAGAAAACGAGGTCGTTCCGTGAATCGGCCAAGTACACCGCTGGTGATGGAGCCACTGCTCTCGATAAATTTCAAGGTTTGCTATACTCGACTGCAATGACAGTGCCTGCTAAAGCAGTAGAGCTTTATTTGGATGCAAGAAGGCTAATTGAAGAACAAGTTAGGAGTTATACTGAACCATACACAGACAAGCTCCTTCCTGATTTGCTACCACAGGAGCAACATGTGTTTACACTTGTTCTTGATCTCAATGAGACATTGATTCACTATATTTGGACGCGAGATACAGGTTGGCAGACTTTTAAAAGACCTGGAGTTGATGCCTTCTTGGAACATTTAGCTCAATTCTATGAAATAGTGGTGTACACAGATGAACAAAATATGTTTGTAGACCCTGTTATAGAAAGACTGGATACCAAGCATTGCATTAGATATAGGCTATCAAGGCCAGCTACTAAGTATCAGGATGGGAAACACTTCAGAGACCTTTCAAAACTAAACAGAAACCCAGCAAAAGTTCTTTATTTAAGTGGCCATGCCTTTGAAAGTTGCCTGCAACCTGAGAACTGTGTCCCTATTAAGGCATGGCAGCAGCAAGATATAGATGACACGGCTCTTCTGGATTTTATACCATTTCTTGAGTGTAAGCATTCCTTGTGA 873 0.4296 MSLGILRSRAVSFASKRFLCTNAASAPLPPPPSATSPSRWNFLKYAVAAALTGGTGLAGYASYAYSLEEIDEKTRSFRESAKYTAGDGATALDKFQGLLYSTAMTVPAKAVELYLDARRLIEEQVRSYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDTKHCIRYRLSRPATKYQDGKHFRDLSKLNRNPAKVLYLSGHAFESCLQPENCVPIKAWQQQDIDDTALLDFIPFLECKHSL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02016 290 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 21 285 - -
Cca05g02016 290 SMART forpap2 146 275 IPR004274 -
Cca05g02016 290 Pfam NLI interacting factor-like phosphatase 149 285 IPR004274 -
Cca05g02016 290 ProSiteProfiles FCP1 homology domain profile. 143 287 IPR004274 -
Cca05g02016 290 Gene3D - 132 289 IPR023214 -
Cca05g02016 290 PANTHER OS05G0513200 PROTEIN 21 285 - -
Cca05g02016 290 SUPERFAMILY HAD-like 135 286 IPR036412 -
Cca05g02016 290 CDD HAD_FCP1-like 148 264 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02016 K17496 - gmx:100803155 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02016 05 40014011 40018503 Cca05g02016 05 40014011 40018503 ECH