Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01992 ATGGCGACGCCGGATTCCGACGCTACGTCTCAGCCTCAAGATTCCGATTCCGTTTCCAATTCTAATCCTCCCAACGCCCTTGTCCCCGCCGCTCCCGCCGTTTGCCTCCTCCGCTTCGCCACCGACTCTGCCGGCGGCGCTCTCATGGGCTCCGTCTTCGGATACGGTGCTGGATTGTTTAAGAAGAAAGGTTTCAAAGGATCCTTTGTAGAAGCGGGATCTTATGCAAAGACATTTGCAGTTTTGTCCGGAGTTCATAGTTTGGTTGTTTGCATCTTGAAACGACTTAGAGGAAAGGATGATGTCATTAATGCGGGGGTGGCTGGATGTTGCACTGGCCTTGCTCTAAGTTTTCCAGGTGCACCACAAGCTCTTTTGCAAAGCTGCCTCACTTTTGGGGCATTTTCTTTTATTATGGAAGGGCTAAACAAGCAGCAGCCAGCACTTGCACTTCCCATGTCTTGGAAAACAACTGTGCAACACAATGCACGTCCTCCCTTGGCGCTCCCCCTTCAACTCCCTCTCCCAGAGGAACTAAAAGAAGCCTTCTCCTTTTTCTCCGAATCTTTGAAGAAGCGCAGCAAGGGGTCTCGGCACCGCAAGCAGCAACAGCATAGTGTGCAAAACCACTTAAGCAAAAGGTTTAATTTATCATCATCGCTCCATTTTCCTCTTCCTTCATCTAATCCTACTTTTTCAGTCACAATGACCTATTCAACTAAATCTCTGCTTTACTTGCGATCATTTTTCATTTCCCTTTTGAGATTCGGAATGCGGCTTATCATCATAAATCGATTAATGAAACTTTTGTTTGCATGTCTATTTTGGTTTTGTGTAGGGTTTCAATGGCTACTGTGCGAAGTCTGA 867 0.4706 MATPDSDATSQPQDSDSVSNSNPPNALVPAAPAVCLLRFATDSAGGALMGSVFGYGAGLFKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFIMEGLNKQQPALALPMSWKTTVQHNARPPLALPLQLPLPEELKEAFSFFSESLKKRSKGSRHRKQQQHSVQNHLSKRFNLSSSLHFPLPSSNPTFSVTMTYSTKSLLYLRSFFISLLRFGMRLIIINRLMKLLFACLFWFCVGFQWLLCEV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01992 288 MobiDBLite consensus disorder prediction 1 25 - -
Cca05g01992 288 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22-2-RELATED 8 179 - -
Cca05g01992 288 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 8 179 IPR039175 GO:0042721|GO:0045039
Cca05g01992 288 Pfam Tim17/Tim22/Tim23/Pmp24 family 39 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01992 Cca-Chr5 39817863 39823467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01992 5 195 Miscellaneous Gene Families AT4G26670 66.495 2.21e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01992 K17790 - gmx:100813557 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01992 05 39817863 39823467 Cca05g01992 05 39817863 39823467 ECH