Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01985 ATGGCGATACTTCATCCTCTCACAAACCCCAACGAGCTTTCTTCGCTCTCACTCTCACTCTCGTGCTCCTGTATCCAACACAATGCACTCACAACCTCCGTTTCTCTCATTCCCCCACAACGCCGCCGTTTCGCCTCCGTCAGATGCTCCTACGCTTACGTCGATAATGCCAAGATTAAGGTAGTCGGCATCGGTGGCGGCGGCAACAATGCCGTTAATCGCATGATCGGTAGTGGTTTGCAGGGTGTAGACTTCTATGCGATAAATACAGATGCTCAGGCACTGTTACATTCTGCTGCTGAGAACCCTATTAAAATTGGAGAAGTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTGGGGGAACAAGCTGCGGAGGAATCAAGAGAAGCTATTGCCGATGCTCTTAAAGGATCGGATTTGGTGTTTATAACTGCTGGGATGGGTGGAGGTACGGGCTCTGGTGCTGCTCCAGTGGTGGCCCAAATATCAAAAGAAGCAGGTTACTTGACTGTAGGTGTTGTTACCTATCCCTTCAGTTTTGAAGGACGTAAGAGATCCTTGCAGGCCTTTGAAGCCATTGAAAGGCTACAGAAAAATGTTGATACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAGCAGATGCCTCTCCAGGATGCTTTCCGTCTTGCAGATGATGTTCTACGGCAAGGAGTTCAGGGAATATCAGACATTATTACAGTACCTGGACTTGTCAACGTGGATTTTGCTGATGTAAAAGCTGTGATGAGAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCCTCTGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTTTAATCGGATCATCTATTCAGTCTGCTACTGGGGTAGTGTATAATATTACTGGAGGAAAGGACATAACCCTACAGGAAGTGAATAGGGTTTCTCAGGTGGTGACTAGTTTGGCAGATCCTTCTGCTAATATTATATTTGGGGCTGTTGTTGATGATCGCTACACTGGGGAGATTCACGTGACTATCATTGCAACTGGCTTCTCGCAGTCATTTCAGAAGAAGTTGCTAATGGATCCAAGGGCTGCAAAGCTGCTTGACAAAGCTGCCGAAGGCCAACAAAGCAAGTCAGCCCCTTCTATCAAGTCCTCAAATAAGGTTGAATCTAGAGCACCCCCGCGGAAGCTCTTTTTTTAA 1233 0.4688 MAILHPLTNPNELSSLSLSLSCSCIQHNALTTSVSLIPPQRRRFASVRCSYAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGEVLTRGLGTGGNPLLGEQAAEESREAIADALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQAFEAIERLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITVPGLVNVDFADVKAVMRDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLMDPRAAKLLDKAAEGQQSKSAPSIKSSNKVESRAPPRKLFF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01985 410 PRINTS Cell division protein FtsZ signature 143 163 IPR003008 GO:0005525
Cca05g01985 410 PRINTS Cell division protein FtsZ signature 171 192 IPR003008 GO:0005525
Cca05g01985 410 PRINTS Cell division protein FtsZ signature 234 256 IPR003008 GO:0005525
Cca05g01985 410 PRINTS Cell division protein FtsZ signature 257 278 IPR003008 GO:0005525
Cca05g01985 410 SUPERFAMILY Tubulin C-terminal domain-like 252 368 IPR008280 -
Cca05g01985 410 ProSitePatterns FtsZ protein signature 2. 142 163 IPR020805 GO:0005525
Cca05g01985 410 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 410 IPR045061 GO:0003924|GO:0005525
Cca05g01985 410 Pfam Tubulin/FtsZ family, GTPase domain 58 218 IPR003008 GO:0005525
Cca05g01985 410 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 151 157 IPR017975 GO:0005525|GO:0005874|GO:0007017
Cca05g01985 410 MobiDBLite consensus disorder prediction 380 410 - -
Cca05g01985 410 SMART Tubulin_C_4 252 369 IPR018316 -
Cca05g01985 410 Gene3D - 266 372 IPR037103 -
Cca05g01985 410 CDD FtsZ_type1 71 359 IPR000158 GO:0003924|GO:0005525
Cca05g01985 410 Hamap Cell division protein FtsZ [ftsZ]. 54 403 IPR000158 GO:0003924|GO:0005525
Cca05g01985 410 Gene3D Tubulin/FtsZ, GTPase domain 51 265 IPR036525 -
Cca05g01985 410 TIGRFAM ftsZ: cell division protein FtsZ 55 369 IPR000158 GO:0003924|GO:0005525
Cca05g01985 410 MobiDBLite consensus disorder prediction 385 399 - -
Cca05g01985 410 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 410 - -
Cca05g01985 410 SUPERFAMILY Tubulin nucleotide-binding domain-like 57 253 IPR036525 -
Cca05g01985 410 ProSitePatterns FtsZ protein signature 1. 89 123 IPR020805 GO:0005525
Cca05g01985 410 Pfam FtsZ family, C-terminal domain 267 360 IPR024757 -
Cca05g01985 410 SMART Tubulin_4 58 250 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01985 Cca-Chr5 39720964 39724211 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01985 K03531 - gmx:100808722 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01985 05 39720964 39724211 Cca05g01985 05 39720964 39724211 ECH