Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01975 ATGAGAGATATACATACGGATAATTACTGTAGTTCACCAAGAACACCAAATGCTCGGCTAAGAAGACGCTCAAATGAGATTCCTCTGGAGATAAGCAAATCAAATGGAAACCATCTACTTATCAATGATAAATATAAATACAGATCAATGTGGATTCGTGCATACTCATCTTTGTGGATGCTAGCGAGTGTCTCACTTATCATATACATGGGTCATCTTTACATCTGGGCCATGGTGGTTATTATCCAAATATTTATGGCCAGTGAGCTCTTCAATCTCCTGAGAAGAGCTAATCAAGATAAACGTCTCCCTAAGATTAAGCTTTTGAACTGGCATTTTTTCTTCACAGCAATGCTATACGTATATGGCCGTATTCTCAGTCAACACCTTGTGAATACAGTGATCTCAGATAAATTCTTCTTTAGACTTGTGAGCATCCTGATCAAGTATCAGATGGCTATATGTTACTTCTTATATATTGCAGGTTTTGTTTGGTTTATTCTTTCCTTGAAGAAGAGATATTACAAGTATCAGTTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACCCAGTCTGCATTCACGGTAGCCAATATATTTGAAGGGATATTCTGGTTTATTTTCCCTGCGTCCCTTATTGCTATGAATGACGTTGCTGCATATTTCTTCGGTTTCTTTTTCGGCAAAACCCCTCTGATAAAGCTTTCTCCAAAGAAAACATGGGAAGGTTTCATTGGAGCATCTGTTGCAACTATGATTGCTGCATTTACATTTGCAAACTTCTTGGGTCGCTTCCAGTGGCTAACATGTCCAAGAAAGGATTTATCAACTGGTTGGCTTCAGTGTGACCCTGATCCAATTTTTCAGCCAGAGTCTATTCCATTGCCAGCATTGATTTCTCATTGGCTTTCTTGGAAAGAGATAGCGGTTTTGCCAGTACAGTGGCATGCCTTGTGCATGGGACTATTTGCTTCAATCATAGCACCATTTGGAGGATTTTTTGCCAGTGGTTTCAAAAGAGCTTTTAAAATCAAAGACTTTGGTGACAGTATACCTGGACACGGTGGATTTACAGATAGAATGGACTGCCAGATGGTAATGGCTGTTTTTGTGTACATTTATCATCAATCGTTTGTTGCCGCCCAAGACTATTCAGTTGAGATGTTTTTGAACCAGATAATGAGGAACCTTCATTCAGAGGAGCAGCTAGTTCTATACAAAAAACTGGGGCAGATATTGCAAGAAAGGCATTTTATCCAATCATGA 1278 0.3905 MRDIHTDNYCSSPRTPNARLRRRSNEIPLEISKSNGNHLLINDKYKYRSMWIRAYSSLWMLASVSLIIYMGHLYIWAMVVIIQIFMASELFNLLRRANQDKRLPKIKLLNWHFFFTAMLYVYGRILSQHLVNTVISDKFFFRLVSILIKYQMAICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFEGIFWFIFPASLIAMNDVAAYFFGFFFGKTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGRFQWLTCPRKDLSTGWLQCDPDPIFQPESIPLPALISHWLSWKEIAVLPVQWHALCMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVAAQDYSVEMFLNQIMRNLHSEEQLVLYKKLGQILQERHFIQS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01975 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 6 423 - -
Cca05g01975 425 Pfam Cytidylyltransferase family 52 382 - -
Cca05g01975 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 6 423 IPR016720 GO:0004605
Cca05g01975 425 PIRSF CDP-DAG_synth_e 6 425 IPR016720 GO:0004605
Cca05g01975 425 ProSitePatterns Phosphatidate cytidylyltransferase signature. 340 366 IPR000374 GO:0016020|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01975 Cca-Chr5 39637550 39643092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01975 2 420 Lipid Metabolism Gene Families AT4G26770 72.854 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01975 K00981 - gmx:100805363 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01975 05 39637550 39643092 Cca05g01975 05 39637550 39643092 ECH