LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca05g01924	ATGGCGAACTCCGAATTACCCTCATTTTCCCTAGGTCTCGACACTCCCCCGAATTCCCCAATCAATCCACCTCCGTCTCCCTCCCTACACGTCTCCGACTCCGATTCCGATTCCGATCCCGAATTCCGACCCGACCCGCCTCGCTCTATTCTCAAACGCCTCCGCCGCGGTCCCCCGCCTCCGCCGCCCTCCTTCCTCGGCGCTGACGACGACGACATCGAGGACTTCTCCTCGCAGGAAGATCCCCATCAAGTGCATGCACCGGCGTGGAATCGTTCCGTGTGCAGTACCTCCAAAGTGTCCTTGAATGGTTGCGGGGCTTTGAGTTCAACCCCTCGCGACTCTAGGGAGAGAAAAAGAAAGGAACCTTCCGATGACGTTCCGTGTTCTTCTAGGTTAGAGACTGGGAAGAGTGGCTTGATGTTTCCCAAGCTAACCGCTAGTCCTCTCCGAAGGTTTCAATTGCTCGATTCCGATTCTGATGATTCAGATCttgatgttggagttggtggtgctgatggggttAGCCCTAACAATCATTTACAACAAAGTAAGAAAACATCTTTTGCTGTGGACGGAGACCAGGATCTGTGGAAGGATTTTTCACCGATGAACAATGTTTCTGTGCCCACGCCGGTGTTCAATGAGTTGTGTGATGAGTACTTCAGTTCTGCCAAGTGCAAGGAAGTGGAGGGTGACGTGAGGTATCCTGGGGTTACTTCTAGCTGCCAGATGGATCAGCAACAATGGGAATCGACCGACCCTGTTCATCCGGCTCATCGTTATTTTTTCCATGAGGATGCGAGAATTCGGCAGTTAGTTTGCACTCGCCTGCGGAATTTTAAACCACTGGGTGTTGGCAATAGAGTGAATCAGCAAACTAATGTCTCACACATTGATTACATGGGACAATTTGGCAATGGAGGAGCTTCAAACATGCAGGGAGTTCAAAGTGGTTTTGTTAACAGCTCTACAAGGGGAAGAAACAGAGCAAGTAATTTGAGTGTTGAGGGATCTTTTAATGCTTCTGGAGGCTGGGTAGATCCCAAAATTCTTTCTCCATTTAGCAATGGGGAATCTTCCAGAAGGAAAGCAGCAACGAGAACTAGCACCAAGAATAGTGTCTCAAAAGGTAAAAATAAAGCAAAGAAATCGGATACTGCAAACCTTTCATGTGCTCCTGCGGGATGGGTGGAACCCAAGAGCTGCACCAGTTTGCCAAAGGATGCAGGCAAAAGGCGTGTTCAAGCAAGTGGTCAATCTGCTGGTCATTGGTATACATCACCAGAAGGAAGAAAGGTTTATGTCAACAAAAGTGGGCAAGAGTTGACAGGCCGGGGTGCTTATAGACAATATCGGAAGGAAAGTGGAGCAGGATTCAAGAAATCAAAAAAGAAAACAGGTGCCAAGAAGACAAATGCCAAGAAGAGAAACTGA	1437	0.476	MANSELPSFSLGLDTPPNSPINPPPSPSLHVSDSDSDSDPEFRPDPPRSILKRLRRGPPPPPPSFLGADDDDIEDFSSQEDPHQVHAPAWNRSVCSTSKVSLNGCGALSSTPRDSRERKRKEPSDDVPCSSRLETGKSGLMFPKLTASPLRRFQLLDSDSDDSDLDVGVGGADGVSPNNHLQQSKKTSFAVDGDQDLWKDFSPMNNVSVPTPVFNELCDEYFSSAKCKEVEGDVRYPGVTSSCQMDQQQWESTDPVHPAHRYFFHEDARIRQLVCTRLRNFKPLGVGNRVNQQTNVSHIDYMGQFGNGGASNMQGVQSGFVNSSTRGRNRASNLSVEGSFNASGGWVDPKILSPFSNGESSRRKAATRTSTKNSVSKGKNKAKKSDTANLSCAPAGWVEPKSCTSLPKDAGKRRVQASGQSAGHWYTSPEGRKVYVNKSGQELTGRGAYRQYRKESGAGFKKSKKKTGAKKTNAKKRN	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	404	430	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	351	389	-	-
	Cca05g01924	478	PANTHER	RHO GTPASE-ACTIVATING PROTEIN	355	478	-	-
	Cca05g01924	478	PANTHER	RHO GTPASE-ACTIVATING PROTEIN	1	350	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	112	128	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	34	52	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	1	16	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	354	376	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	90	110	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	463	478	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	445	478	-	-
	Cca05g01924	478	MobiDBLite	consensus disorder prediction	1	135	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca05g01924	-		-	ccaj:109788794	837.795

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca05g01924	05	39067447	39071414	Cca05g01924	05	39067447	39071414	ECH