Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01918 ATGGAACTCAAACTGCTTCTGATTCTAAAGCTACTTTTTGCAGCTTTGGCCGCTGAATCTGAATACGTTCGCCCTCTGCCTCGTAAAACCTTAACCATCCCATGGGATTCAATCTCCAAGTCCCACTCCTCCTACCCTCAACAGGTTCGCATTTCTTTGGCAGGAGAGAAGCACATGAGAGTTACTTGGATAACTGATGATAAGCGTTCACCTTCATATGTAGAATATGGAACATTACCCGGGAGATATGATTCAATAGCTGAAGGAGAGTACACCTCTTATAATTATCTGCTGTATAGCTCAGGAATGATACACCATGCTGTAATTGGTCCTTTGGAAGACAACACTGTGTACTTTTACCGGTGTGCTGGGAAAGGTCCTGAGTTTCAGCTCAAAACCCCTCCGGCTCAATTTCCTATTACTTTTGCTGTGGCTGGGGATCTAGGTCAAACTGGTTGGACTAAATCCACATTGGATCACATTGATCAATGTAAATATGATATTTACCTGCTTCCAGGGGACCTTTCATATGCTGATTGTATGCAGCATCTGTGGGACAATTTTGGGAGACTAGTGGAGCCACTTGCTAGTGCAAGACCATGGATGGTGACAGAGGGAAACCATGAAGAGGAGAACATACCGTTGTTAACGGATGAGTTTGTATCATATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTTTATTATTCTTTTGAAGTTGCAGGTGTTCACGTTGTCATGCTTGGCTCCTATGCGGATTATGATGTGTACTCTGAACAGTATAGATGGCTAAAGGCAGATCTGCTAAAGGTGGATAGGAAAAGGACACCTTGGCTGCTTGTGTTATTTCATGTGCCATGGTATAATAGTAACAAGGCTCATCAAGGTGCAGGGGATGATATGATGGCAGCTATGGAGCCGTTGCTTTATGCTGCCAGTGTTGATTTAGTTATCGCTGGCCATGTTCATGCTTATGAACGTTCGAAACGTGTGTATCATGGAAGATTGGATTCTTGTGGTGCCGTCCATATAACTATTGGCGATGGAGGAAACAGGGAAGGCTTAGCTCATAGGTATATAAACCCACAGCCAACATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCCACTCATGCTTTCTGGAGTTGGCACAGGAATGATGATGATGAGTCAGTGAAAGCTGATGATATCTGGATAACCTCTTTGGTTAGCTCAGGATGCATTGATCAGAAGACACATGAACTCAGAAGTACACTTATGACACCCTAA 1311 0.4333 MELKLLLILKLLFAALAAESEYVRPLPRKTLTIPWDSISKSHSSYPQQVRISLAGEKHMRVTWITDDKRSPSYVEYGTLPGRYDSIAEGEYTSYNYLLYSSGMIHHAVIGPLEDNTVYFYRCAGKGPEFQLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYDIYLLPGDLSYADCMQHLWDNFGRLVEPLASARPWMVTEGNHEEENIPLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVVMLGSYADYDVYSEQYRWLKADLLKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLYAASVDLVIAGHVHAYERSKRVYHGRLDSCGAVHITIGDGGNREGLAHRYINPQPTWSEFREASFGHGELKIVNSTHAFWSWHRNDDDESVKADDIWITSLVSSGCIDQKTHELRSTLMTP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01918 436 Pfam Iron/zinc purple acid phosphatase-like protein C 347 405 IPR025733 -
Cca05g01918 436 PANTHER PURPLE ACID PHOSPHATASE 5 426 - -
Cca05g01918 436 SUPERFAMILY Metallo-dependent phosphatases 139 404 IPR029052 -
Cca05g01918 436 Pfam Purple acid Phosphatase, N-terminal domain 46 126 IPR015914 GO:0003993|GO:0046872
Cca05g01918 436 Gene3D - 45 136 - -
Cca05g01918 436 Gene3D - 137 423 IPR029052 -
Cca05g01918 436 PANTHER ACID PHOSPHATASE RELATED 5 426 IPR039331 GO:0003993
Cca05g01918 436 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 135 IPR008963 GO:0003993|GO:0046872
Cca05g01918 436 CDD MPP_PAPs 137 415 IPR041792 -
Cca05g01918 436 Pfam Calcineurin-like phosphoesterase 141 331 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01918 Cca-Chr5 39007514 39010195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01918 46 423 Miscellaneous Gene Families AT2G03450 26.549 1.15e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01918 K22390 - gmx:100787977 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01918 05 39007514 39010195 Cca05g01918 05 39007514 39010195 ECH