Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01917 ATGGCTTTCGTTGGGAGCCGAATTCAAAGCAACACCTGGTTCAAGTTCAAACCTTCTTCCCGCGGTCACAAGCCCTTGAAGATTTGGATGTCGACAACGCAAGGCCAATCAAAAAGACCCATTTGCCCATCTTGTTCCAAACCCACCCGAACCTGTCTCTGCTCTCGAATCCTCACACCAGGTATCCAAAATTCCGTGCACGTCACCATTCTGCACCACGCCCTAGAGCGTAAGCACCCGCTCAATTCTACCAGAATCGCTATATTGGGCCTCAAGAATCTCACCGTTGCAACTGTTTCCGATGTTAATTTCCAAGCCCGCTTCCTGATTCGGTTGTTGGATCCGAATTCCCATTCGGGTCATGCCGGAAACGTGTCAGATGGGTTGTTTTCTCGTCAGTCACGGGAAATTGGTGATACCCAGAAATTGTTTCATGAGAAAAATTATAGCTTGATTGATTCTGATAGTGCTGGAAAATGTGAACTTGGAGATGTTCTGAATTCTCCTTCTCACGCTGAAGTTGTGAATCAAGTGGGTACTAGTGATGGTGCAGTGATGAACGATGAAGTTGAGAAAAATGCAATTCGTCCAAATTGTGATTTAACTAGAGGTCTAGATGAAGATAATGAAGGGCTTGCTATTAGTGTTGCCATTGGCAAATATGGTACCATTAGCTCTCTTTCTCACATTTGGATGACACAAGCACAATGTCAATCCCCCAAATTAAGCTTTGACAAGATTTTGGCTTACCCCGAAGCTCGTGAAGCACTCTCAAAAGGGTTTTTGGTGAAGAAGTTCCAAAGGAAGCAACTGAATAGTGGCGTAGACTTGGAAGAAGAATGTGAAGAATTTGAGCTTGAGGTTCCTCCTGGATCAGTACTGTTATTTCCCTCCGATAAGGCTGTTAATATTAATGACCTGGATGCTATTGGTTTTGAGGTGAAGAACTTGATTGTTCTGGATGGAACATGGGCCAAGGCAAAAAGGATTTATAGTGAGAATCCTTGGTTGAACATTTTGCCCCATGTGAAGTTGGAAGTGAATGAGATGAGCTTATATAGTGATGTGAGACATCAGCCGAGGGCTGGTTATCTGTCCACCATTGAGAGCATTGTATTTGCCTTGAAGGCAGTTGGGGAGAATCGTGAGGGTTTGGATGGTCTCTTGGATACTTTTGAATCCATGGTTGGAGATCAGAGACGCTGTAAAGAGGAGAGACTGAGCAAACAGTTTGAAGAAGTTGCTTCAACCCAAATAGAAACTGTTTGCAAGAAATTGTGA 1281 0.4395 MAFVGSRIQSNTWFKFKPSSRGHKPLKIWMSTTQGQSKRPICPSCSKPTRTCLCSRILTPGIQNSVHVTILHHALERKHPLNSTRIAILGLKNLTVATVSDVNFQARFLIRLLDPNSHSGHAGNVSDGLFSRQSREIGDTQKLFHEKNYSLIDSDSAGKCELGDVLNSPSHAEVVNQVGTSDGAVMNDEVEKNAIRPNCDLTRGLDEDNEGLAISVAIGKYGTISSLSHIWMTQAQCQSPKLSFDKILAYPEAREALSKGFLVKKFQRKQLNSGVDLEEECEEFELEVPPGSVLLFPSDKAVNINDLDAIGFEVKNLIVLDGTWAKAKRIYSENPWLNILPHVKLEVNEMSLYSDVRHQPRAGYLSTIESIVFALKAVGENREGLDGLLDTFESMVGDQRRCKEERLSKQFEEVASTQIETVCKKL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01917 426 PANTHER DTW DOMAIN-CONTAINING PROTEIN 2 22 409 - -
Cca05g01917 426 Pfam DTW domain 39 400 IPR005636 -
Cca05g01917 426 SMART DTW_2a 38 404 IPR005636 -
Cca05g01917 426 PANTHER UNCHARACTERIZED 22 409 IPR039262 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01917 - - gmx:100797499 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01917 05 39005124 39007322 Cca05g01917 05 39005124 39007322 ECH