Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01916 ATGCACGATTTCTGCTTCACGATTCCGTACGGATTGATGTTAGTGGGTGGTGGACTGTTCGGATACATAAAGAAAGGAAGCATAGCCTCTCTCGGCGGAGGAGTGGCTTCCGGTTTGCTTCTCATCGTCGCCGGTTATCTCAGCCTCAACGCTTTCGGAAAGCGCAAGAACTCTTACCTCGCTCTCATCCTCGAGACCGTTTGTGCAGCCGTACTAACTTGGGTCATGGGACAGCGATATTTGGAAACATCCAAGATTATGCCTGCTGGTCTTGTTGCAGGAATCAGTGCTCTCATGACTCTGTTTTATCTCTACAAACTAGCAAATGGTGGCAATCATCTCCCCACCAAGGCCGAGTGA 360 0.4972 MHDFCFTIPYGLMLVGGGLFGYIKKGSIASLGGGVASGLLLIVAGYLSLNAFGKRKNSYLALILETVCAAVLTWVMGQRYLETSKIMPAGLVAGISALMTLFYLYKLANGGNHLPTKAE 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01916 119 Pfam Transmembrane proteins 14C 6 103 IPR005349 GO:0016020
Cca05g01916 119 Gene3D - 1 111 IPR044890 -
Cca05g01916 119 PANTHER PROTEIN FATTY ACID EXPORT 5-LIKE 1 119 - -
Cca05g01916 119 PANTHER TRANSMEMBRANE PROTEIN 14, 15 1 119 IPR005349 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01916 - - gmx:100306195 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01916 05 38996685 38999557 Cca05g01916 05 38996685 38999557 ECH