Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01914 ATGGCGAACATAGCGTGCCTCTTGCTCCTACTTTCAGTGTCGGTAACGGGCCTTCACCAAGTTTGGGCCATGAAATCGGCGTTTAAGCCGCGAGACGTGCTTCCTCTGCTTCCGAGACAGGTGTCGTGGCCCATCCTCAACCGCCTCCACAGCGCGGTGGATCTTCTCCCCGTCTTCGTCGGCGCCGCCTCTTCCCCCGACGACAATCTCCAGTGGAAGGGTGCGTGTTTCTACGAGAACAAAGCCTGGATGGTGCTTCACAATAAGAGCGGCACTGAATTTGGTGGCGGAACCCTTCACATAAAGGTTAGCAATGCTCACAGTTGGACATGCATGGATCTTTATATTTTTGCCACCCCTTATCGTGTAACATGGGATTATTATTTCCTGGCCCGGGAGCATACACTTGAGATCAATGCATGGGAAGGGAAAGCCGAGTATGAGTATGTAAAAAACCATGGGTTATCAATTTTCCTCTTGCAAGCTGGGATGTTGGGAACCCTTCAAGCACTTTGGGAGGTCTTCCCCCTGTTTACAAATACTGGATGGGGCGAAAACTCCAATATTAAATTTTTGGAGAAACATATGGGAGCTTCTTTTGAAGTACGCCCTCAGCCTTGGGTTACAAATGTCAGTGCTGATGACATTCATTCTGGAGATTTCCTTGCCGTTTCAAAAATTCGAGGTCGGTGGGGTGCTTTTGAGACTCTAGAGAAGTGGGTTAGTGGAGCTTATGCTGGTCACACTGCTGTTTGCCTAAGGGACTCCGATGGGAACCTTTGGGTTGGAGAGTCAGGACATGAAAATGAAAAGGGAGAAGATGTGATTGCTTTGATACCATGGGAAGAGTGGTGGGACTTTGAACTGAATAAAGATGATTCCAATCCCCATATTGCACTGCTTCCAATGCACCCTGATTTGCGTGCCAGGTTTAATGAGACTGCTGCATGGGAGTATGCACTGAGCATGGCAGGAAAACCATATGGTTACCATAACATGATCTTCAGTTGGATAGACACTTTAAATGGAAATTATCCGCCTCCTTTGGATGCTAACGTGGTTGCTTGTGTTATGACAATTTGGAGTCAAATCCAACCTGAATATGCAGCAAATATGTGGAATGAAGCTTTGAACAAACGACTTGGAACTAAAGGACTTGACCTTCCAGAAGTTTTAGTAGAAGTTGAAAAGCGTGGATCATCTTTTGATGAACTGCTGACAATTCCTGAACAGGATGACTGGGTGTACAGTGATGGGAAGTCAACTTCTTGCATTGCTTTTATACTTGAGATGTACAAGGAGGCAGGACTGTTTGATCCAATTGCTAGTTCTGTTCAAGTGACAGAGTTTACGATAAAAGATGCTTACATTCTCAATTTTTTTGAGAATAATTCTAGTCGCTTGCCAAAATGGTGCAACGATGGAGACACGGTGAAGCTTCCTTATTGTCAAATTAAAGGCAAGTATAGAATGGAATTACCTGGATACAACACCATGCAACCATACGCTCATATGAATGAAAGATGTCCATCTCTTCCTACAAAGTACTTCAGACCCAAGAATTGCTAG 1569 0.4512 MANIACLLLLLSVSVTGLHQVWAMKSAFKPRDVLPLLPRQVSWPILNRLHSAVDLLPVFVGAASSPDDNLQWKGACFYENKAWMVLHNKSGTEFGGGTLHIKVSNAHSWTCMDLYIFATPYRVTWDYYFLAREHTLEINAWEGKAEYEYVKNHGLSIFLLQAGMLGTLQALWEVFPLFTNTGWGENSNIKFLEKHMGASFEVRPQPWVTNVSADDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSDGNLWVGESGHENEKGEDVIALIPWEEWWDFELNKDDSNPHIALLPMHPDLRARFNETAAWEYALSMAGKPYGYHNMIFSWIDTLNGNYPPPLDANVVACVMTIWSQIQPEYAANMWNEALNKRLGTKGLDLPEVLVEVEKRGSSFDELLTIPEQDDWVYSDGKSTSCIAFILEMYKEAGLFDPIASSVQVTEFTIKDAYILNFFENNSSRLPKWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYAHMNERCPSLPTKYFRPKNC 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01914 522 Gene3D endopeptidase domain like (from Nostoc punctiforme) 210 453 - -
Cca05g01914 522 PANTHER OS01G0793500 PROTEIN 15 522 - -
Cca05g01914 522 PANTHER PLANT/F10M23-360 PROTEIN 15 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01914 Cca-Chr5 38981963 38987329 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01914 - - gmx:100789468 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01914 05 38981963 38987329 Cca05g01914 05 38981963 38987329 ECH