Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01909 ATGAGCTGTAATTTGTTTCATCAACAGTCTGTTGCTGCAGATCTATCTCATGCACAAAATAATATATGCCAGCTTGCCAGTGCCGGTGACAATGCAGTTACTTCACCATTTGAGACTGAAAAAGGTGCAAACCTAATGATGATGAGAGGTATGACGGCCAAGGATTTTGACCCTGTAAGATATTCAGGAAGATGGTTTGAAGTTGCTTCACTTAAACGTGGATTTGCTGGACAAGGCCAAGAAGATTGTCATTGCACTCAGGGTGTATATACATTTGATAGGGAAGTACCATCTATCCAAGTTGATACTTTTTGTGTTCACGGAGGCCCTAATGGATTTATAACTGGAATTAGGGGAAAGGTTCAATGTCTTTCAGAAGAAGATTTGGAGAAAAATGAAACACGGCTAGAGATGCAGGAAATGATCAAAGAAAAATGCTATCTCCGTTTTCCTACATTGCCATTCATTCCGAAGGAGCCTTATGATGTGATTGCCACTGATTATGACAATTTTTCTCTTGTCTCAGGAGCTAAGGATAAAAGTTTTATTCAGATATACTCAAGGACACCTAACCCTGGACCTGAATTTATAGAGAAGTACAAGTCTTACCTTGAGAACTTTGGATATGATCCAAGCAAAATTAAAGATACACCCCAGGATTGTGAAGTAATGTCGAATAGTCAGCTGGCAGCTATGATGTCTATGTCTGGAATGCAGCAGGCACTAACAAACCAGTTTCCTGATCTAGGACTCAACGCCCCTATTGAGCTTAATCCCTTCACAAGTGTATTTGACACTTTGAAGAAGCTTCTTGAGCTTTATTTTAAGTAG 831 0.3971 MSCNLFHQQSVAADLSHAQNNICQLASAGDNAVTSPFETEKGANLMMMRGMTAKDFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDREVPSIQVDTFCVHGGPNGFITGIRGKVQCLSEEDLEKNETRLEMQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDKSFIQIYSRTPNPGPEFIEKYKSYLENFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLNAPIELNPFTSVFDTLKKLLELYFK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01909 276 PANTHER CHLOROPLASTIC LIPOCALIN 13 276 - -
Cca05g01909 276 PANTHER LIPOCALIN 13 276 IPR002345 GO:0036094
Cca05g01909 276 Coils Coil 124 144 - -
Cca05g01909 276 Gene3D - 51 233 IPR012674 -
Cca05g01909 276 Pfam Lipocalin-like domain 59 219 IPR000566 -
Cca05g01909 276 ProSitePatterns Lipocalin signature. 55 68 IPR022272 -
Cca05g01909 276 SUPERFAMILY Lipocalins 52 232 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01909 - - gmx:100787880 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01909 05 38931911 38934832 Cca05g01909 05 38931911 38934832 ECH