Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01448 ATGAGGTGCGCATCGGTCAACTTTGGTCAATTTTGGAGTAAGAAAGCTTTATCCGATAAATTAGTGATTTGGGGTGGAGTGGGGAAGAGTGGAAATTTGCTTGGGATTGAGAAAGGAAAAAGGGATGAGACAGTTCCACTTCCAACCTCCAAACCCAACAGAAACGGCGCGCCCGCCACCAACGCCAACGCCAGCCCCATCAAGTCCCAACTCTACAACCCCAACCATCAAGTTTACCAGCCGCAATCGCGCTACCATGGGCGGTGCCGCTCCCACTGCAACCTCTGTTGCTGCTGCCGCTTCTGGACCATCCTGATGATGCTCGACGTGGTGCTCCTCGCCGCCATTGTCAGCGCCGCACTGTACGTACTGTACCCTCCCCACCGCCCTGAATTCTCCGTGACGAACCTCCGCATTGCGAGGATGAACCTGACGACGCCGTCGGACTCGCCCTCGCACCTCAACACGCTCTTCAACCTCACGCTCATCGCCAAGAACCCCAACAACCACATGGTCTTCTTCTACGACCCATTCTCCGTAACGGTGTTCTCGAACCCCGTCCCCGTGGAAAACGGCTCCGTGACGGCGTTCTCCTCGGGCAAGAACTACCAGATGAGCCTCCGCGCGGTGCTCTCGGGGTCGCAGGATCTGGACATTGACTCCCTAAGCAGTGTGAGATCGGGTCTGAAGATGAAGAAGGGTTTCCCCGTTCAGATTCAGACGGACACCAAGGTGAAGATGAAGATGGACTCGCTCAAGAGCAAGAAGGTCGGAATCAGAGTCACCTGCAACGGAATCAGAGGCACCGTTCCCGCCGACAATCACGAGGTTGCATCCGTCGTCGACTCCGAGTGGAGTACGAGGAACTGTTGGAGGGCATGCGCGAGCATTGATCAGCGGCTTGAAAGAGAAGGCGTGGTCAAGGCTCAGGGCTGGAAGGCAAGTGTACCGTCCCGGCCTATTTCCGATACGATTCATAGGAGTGGTTGCTTAAGCCCTTTCGCCTTTCAGGCTCAGGGTTAG 1023 0.5611 MRCASVNFGQFWSKKALSDKLVIWGGVGKSGNLLGIEKGKRDETVPLPTSKPNRNGAPATNANASPIKSQLYNPNHQVYQPQSRYHGRCRSHCNLCCCCRFWTILMMLDVVLLAAIVSAALYVLYPPHRPEFSVTNLRIARMNLTTPSDSPSHLNTLFNLTLIAKNPNNHMVFFYDPFSVTVFSNPVPVENGSVTAFSSGKNYQMSLRAVLSGSQDLDIDSLSSVRSGLKMKKGFPVQIQTDTKVKMKMDSLKSKKVGIRVTCNGIRGTVPADNHEVASVVDSEWSTRNCWRACASIDQRLEREGVVKAQGWKASVPSRPISDTIHRSGCLSPFAFQAQG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01448 340 PANTHER HARPIN-INDUCED PROTEIN 51 281 - -
Cca05g01448 340 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 51 281 - -
Cca05g01448 340 MobiDBLite consensus disorder prediction 48 67 - -
Cca05g01448 340 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01448 Cca-Chr5 33185550 33189749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01448 74 284 EF-hand Containing Proteins AT5G21130 27.273 8.89e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01448 - - ccaj:109799500 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01448 05 33185550 33189749 Cca05g01448 05 33185550 33189749 ECH