Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01416 ATGGAGATACAGACTTGTGGCAAGCCAATTGATTCCTTGCTAGAGAAGGTGCTTTGCATGAATATTCTGTCCTCTGATTACTTCAAGGAGCTCTATCGCTTGAAAACGTATCACGAAGTTATTGATGAGATCTACAATCAAGTTGATCATGTGGAGCCGTGGATGACGGGGAATTGTCGCGGTCCTTCAACTGCCTTTTGTCTTCTCTACAAGTTTTTTACCATGAAGCTCACTGTCAAGCAGATGCATGGGTTGTTGAAACATCCTGATTCTCCTTACATTAGAGCGGTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTGTGGAATTGGTTTGAGCCATATATTAAAGATGATGAGGAATTTTCTCCCGGATCTAATGGTCGAATGACTACAATGGGTGTATATGTCCGTGATTTGCTTCTTGGACAGTATTACTTCGACACACTGTTTCCTCGCATTCCTGTTCCTGTATTGCGGCAGGTTGTGTCTCATCTTGAAAAGATGAAGCTCCCTACTACACATTCTGGTTCAACCGGGGAATCCACCCGTCATGGTTCTGATGATACTGCTCGTAGACCACCTTCTGTTAAGGCTGCTCTTTCAGTCTCTTTTGGTCAGCGGGCTCCACATCGTGCCTCCACAAGGGATTCTTCACCTATTCGCCGTACATTACCTTCTCACGAAAGAAATGGCAGTGATGACATCCGAAGATCTCCAACTAGTCGACGCAGCCAGAGCCGTGAATATCCTgatagggatagggaccgggaacggtcacggtccagagacagggaacgtgaccgtgatagggatagggatcacgatagggaCAgggatcgggatcgggaccgtgatagggacagatatcgtgaccgagataggaacagggagtgggagcgagaccgagaccgggaAAGACACAGGGATCGTGACTCGGACAGAGATCTGGAGAGGGACAGAATGAGGAGGGATAAGGAGCGGGAAAGAGAGAGGAGTTATGATCATGACAGGAGATCTAGGTACACAGAGAGAGAAAGCAGCCGGGATTATGACAATGGTAGCAGGCACTATCgtagaagcagaagtcgcagtagaagtaggagcaggagtagaagCCAGAGCCTGCAAGCTGGCACTGCACGCAATGAACCGCGTTCTAGTCCTCAAAGAGATGGAAGTAAGAGAACTTCTGCATCCAGTAATCTAGCTAAACTTAAGGATATGTATGGTGATTTAGGGGATACTAAAGGAGATGCCAACATGGAAAGAATTCCTAGAAAGGATAGTGGAGGAGAAGAGGTTATTAGACTTGGCGGTTCTACATGGAAGTATTGA 1347 0.3853 MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSHLEKMKLPTTHSGSTGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPSHERNGSDDIRRSPTSRRSQSREYPDRDRDRERSRSRDRERDRDRDRDHDRDRDRDRDRDRDRYRDRDRNREWERDRDRERHRDRDSDRDLERDRMRRDKERERERSYDHDRRSRYTERESSRDYDNGSRHYRRSRSRSRSRSRSRSQSLQAGTARNEPRSSPQRDGSKRTSASSNLAKLKDMYGDLGDTKGDANMERIPRKDSGGEEVIRLGGSTWKY 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01416 448 MobiDBLite consensus disorder prediction 373 407 - -
Cca05g01416 448 MobiDBLite consensus disorder prediction 413 437 - -
Cca05g01416 448 MobiDBLite consensus disorder prediction 173 448 - -
Cca05g01416 448 PANTHER UNCHARACTERIZED 296 447 IPR005037 -
Cca05g01416 448 PANTHER UNCHARACTERIZED 1 318 IPR005037 -
Cca05g01416 448 MobiDBLite consensus disorder prediction 218 361 - -
Cca05g01416 448 PANTHER PRP38 FAMILY PROTEIN 1 318 - -
Cca05g01416 448 PANTHER PRP38 FAMILY PROTEIN 296 447 - -
Cca05g01416 448 Pfam PRP38 family 11 161 IPR005037 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01416 K12850 - gmx:100788237 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01416 05 32600000 32606211 Cca05g01416 05 32600000 32606211 ECH