Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01413 ATGGGAAAGACACGCACTGTTGGCGTAGCTGTGGACTTCTCTGCCACCAGCAAATTAGCCCTTCGTTGGGCCGTTGATAATCTCATCAACAGAGGTGATCAAATCATCTTGATCAACGTTCAACCTCCCCAATCTCATCACACCCGAAAGGAGCTTTTTGAGGACACTGGTTCACCTTTGGTGCCTTTGGAGGAATTGAGAGAGTTGAACTTCACTAAGCAATATGGGATTGCTAGGGATCCTGAGGTCATAGATATCCTAGACACTGCCTCCAGGACTAAAGGGGCAAAGGCAGTGGCAAAGGTGTACTGGGGAGATCCAAGGGAGAAATTGTGTAATGCTGTGGAAGATCTTCACCTCGACTCTTTGGTTGTTGGAAGCAGGGGTTTAGGTCCCATTAAAAGGGTGTTGTTGGGCAGTGTAAGCAAGCATGTCATGACAAATGCTTCTTGCCCCGTCACGGTGGTTAAAGGAAAGCAGTCTTCCAATTCCACACATTAA 501 0.475 MGKTRTVGVAVDFSATSKLALRWAVDNLINRGDQIILINVQPPQSHHTRKELFEDTGSPLVPLEELRELNFTKQYGIARDPEVIDILDTASRTKGAKAVAKVYWGDPREKLCNAVEDLHLDSLVVGSRGLGPIKRVLLGSVSKHVMTNASCPVTVVKGKQSSNSTH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01413 166 PANTHER IMP2'P 1 160 - -
Cca05g01413 166 CDD USP_Like 6 156 - -
Cca05g01413 166 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Cca05g01413 166 PANTHER OS02G0773200 PROTEIN 1 160 - -
Cca05g01413 166 Pfam Universal stress protein family 5 157 IPR006016 -
Cca05g01413 166 Gene3D HUPs 2 166 IPR014729 -
Cca05g01413 166 PRINTS Universal stress protein signature 4 22 IPR006015 -
Cca05g01413 166 PRINTS Universal stress protein signature 117 129 IPR006015 -
Cca05g01413 166 PRINTS Universal stress protein signature 135 157 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01413 Cca-Chr5 32580753 32581984 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01413 - - gmx:100500682 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01413 05 32580753 32581984 Cca05g01413 05 32580753 32581984 ECH