Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01390 ATGGGAGTGCTTTCCAACATGATCGATCGGGAACAACTGAAGCCCGGTGATCACATTTACTCTTGGAGGCAAGCATACATCTATGCACACCACGGAATATATGTCGGTGATGGAATGGTGATCCACTTCACCAGAGGAGCAGGTCAAGAAATTGGAACTGGAACTGTGTTGGACAGTATCCTTTTCAGTTCATCTCCCTCTCATTATTCTGACACTCCATGCCCGAGATGTGGCGACCAAAGTACAAGTGATGGTGTCATCTCTTCCTGTTTGGATTGTTTCCTTTCTGGTGGTAATCTATATGTCTTTGAGTATGGTGTCTCGCCTGCATTTTTTCTGGCCAAAGCTCGAGGAGGCACCTGCACTCTTGCTCCTTCTGATCCAACTGAAGATGTCCTTCGCCGTGCTTCATTTCTTCTTGAAAATGGGTTTGGTGGCTACAATTCTTTCAAGAATAACTGTGAAGACTTTGCACTTTACTGCAAAACAGGTCTTCTTGTACTCACAAGCCTCGCTGTTGGCCGCAGTGGTCAAGCAGCATCTTACTTAGCTGCTGCTAGTACTATAGTTTCAACTCCGCTTCGTTTTATGACCACCAGTTTCAGTGGTTTGGCATTGGTTGGTTTCAGTTTTTACTGTGTTGGCCGATTGGTATCTGATATTGGAGTACGTCGTGACGTGGCCAAAGTTCCAGTGGAGAACCTTATAGCTTCACCTGCCTTAGGTGTACCAGAGAACACGGCCCAGATGACTGAGAAGCTTATAACTTCACCTGCCTTGGGTGTACCAGAGAACACGGCTGAGATGGCCAAGGAAGATTAG 822 0.4647 MGVLSNMIDREQLKPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDSILFSSSPSHYSDTPCPRCGDQSTSDGVISSCLDCFLSGGNLYVFEYGVSPAFFLAKARGGTCTLAPSDPTEDVLRRASFLLENGFGGYNSFKNNCEDFALYCKTGLLVLTSLAVGRSGQAASYLAAASTIVSTPLRFMTTSFSGLALVGFSFYCVGRLVSDIGVRRDVAKVPVENLIASPALGVPENTAQMTEKLITSPALGVPENTAEMAKED 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01390 273 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
Cca05g01390 273 PANTHER OS05G0310600 PROTEIN 1 238 - -
Cca05g01390 273 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
Cca05g01390 273 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 170 - -
Cca05g01390 273 PANTHER OS05G0310600 PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01390 Cca-Chr5 32200940 32207184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01390 - - ccaj:109814159 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01390 05 32200940 32207184 Cca05g01390 05 32200940 32207184 ECH