Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01385 ATGGTGTGGGGACTCTTCCCCGTTGATCCTCTTTCAGGTGAAGAAAAGTACTACATTTTCAAAAAGGGAGTTTACAAAGTTGGTCGAAAAGGTTGTGATGTGATAATTACTAAAGATAAAGGGGTTTCTCGGGTTCACGCAGAAATAGTTGTTAATACGATGAACCCAGCAAATCGTTTACCAAATGAACGTTCTCATTTGTCATCCAGTATACATATTAGAGATTGCTCCAAGTACGGGACATTTATTAGCAAGAATGTTGGGTCCAAGAAAAAAGTTCATGAGCTACCAAACAAAGAAACAGTATTAGAGGATGGTGACCTTGTTTCTTTTGGCACCGGTACTGCTACCTACAAGTTTTGCCATGTCCCCCTCATTTTTTTCATCTGTTCCTCAAATAAAGTGGATCAATCTCTTGAAGAGAAAATTTCATCAATTGGTGCTAGTATTATTCATACCTTAGGTGAAGAGTGCACACATGTTCTGGTAGATCAACTAATGCCATTGAAGAAGGATCTTGTCGGTGCTGTTGTGGCAAAAAAATCTTGTGTACTCAAAACTTGGCTTGAGATTTTTGCAGAAAAGAACATTAGCACTGAAATTCCTAGCTGTCATTCATATATTCCCTCAGTGTCAGCTGGAGGAGAATCTATTAAAATTGCTGACCCCAGAATGCGTGAAGACTGCTTGAAAGGATACACTTTTTTGTTGGAATCTGAGCATTTGTATAGATTTGGGAATCAGCTAAAATCTTTATTAGAAGTGGCTGGTGCAAAAGTTGTTTCCTTTGAAGTTTTTTGTTCAAATAGCCAAGGTTCAGATTATGCAGAGGATAATCGTGTGGTTTGTGTCATCCCTGGAGGAGGATCATCATACAAGTCTGATCTCTTCAATAAACAAAGTTCCTTGCTTAGAGTGGATGAGATGGATGTAATATGTGCCGCTTTCAGTGGACAGTTAGATCTGTCTATTCTGAAATCACCATGCATACTTGTTTCATCATCTTGCTCTACAGATGAGACGATTGTACCAGATTCGGAAACTGAAGTTGAAACAGCCACATCCGCCCACTCAAATGAGGCATTTAGCAACCACAATAATGTAAAATATGAAAAAACAGAAGAATTATATGATGATTCTGACACTTTAGATAAGAGAAAACATGAGAGAGTAGAGGCATCCTGCGATGATGTTTCGACCAGATTGCATGAAATTAAAAGTGCAAAAACAGAAACATCCTTGGATGGTGCTTCTGTCAGATCACATGATACCAGCTTCGGGAATAATGATGGTATTAGAGTAAAGAAAGACAAGGCTGACGATTATGAAAGTGGAAATTCAGATATTGTTTACGGCCAACATTTAGTTGTTCGAGATACAAACCTACATACTAGCACAAGTACTGCACCAAACAGCAATGTTCCAAATTTTAAACGCTTCCGAAAGGCAGAAACTCAATCTGGTAACAGCTTTGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTGACTGTGGGAATGATGAGACGGCTGAGTTGGTGAAGGAGGAGAAAAGGCGAAAGAAAATGGAAGCTGTGGCAGATGAACTATTTAATAATCATAAGACAAAAAAGCGAGGCACTGTTGGTTCTCTTCGCGGCATTCTTACTTAA 1659 0.3876 MVWGLFPVDPLSGEEKYYIFKKGVYKVGRKGCDVIITKDKGVSRVHAEIVVNTMNPANRLPNERSHLSSSIHIRDCSKYGTFISKNVGSKKKVHELPNKETVLEDGDLVSFGTGTATYKFCHVPLIFFICSSNKVDQSLEEKISSIGASIIHTLGEECTHVLVDQLMPLKKDLVGAVVAKKSCVLKTWLEIFAEKNISTEIPSCHSYIPSVSAGGESIKIADPRMREDCLKGYTFLLESEHLYRFGNQLKSLLEVAGAKVVSFEVFCSNSQGSDYAEDNRVVCVIPGGGSSYKSDLFNKQSSLLRVDEMDVICAAFSGQLDLSILKSPCILVSSSCSTDETIVPDSETEVETATSAHSNEAFSNHNNVKYEKTEELYDDSDTLDKRKHERVEASCDDVSTRLHEIKSAKTETSLDGASVRSHDTSFGNNDGIRVKKDKADDYESGNSDIVYGQHLVVRDTNLHTSTSTAPNSNVPNFKRFRKAETQSGNSFDNLVPFAKYPYKDSDCGNDETAELVKEEKRRKKMEAVADELFNNHKTKKRGTVGSLRGILT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01385 552 Gene3D - 3 122 - -
Cca05g01385 552 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Cca05g01385 552 SUPERFAMILY SMAD/FHA domain 13 123 IPR008984 GO:0005515
Cca05g01385 552 CDD BRCT 127 190 - -
Cca05g01385 552 PANTHER NIBRIN-RELATED 2 539 IPR040227 GO:0006302|GO:0007095|GO:0030870
Cca05g01385 552 Coils Coil 515 535 - -
Cca05g01385 552 Pfam FHA domain 25 112 IPR000253 GO:0005515
Cca05g01385 552 CDD FHA 2 120 IPR000253 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01385 K10867 - gmx:100783205 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01385 05 32121015 32131150 Cca05g01385 05 32121015 32131150 ECH