Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01150 ATGGAAGGGGTTTCGGATCAAGGCACTAGTACATGCTCTCACTGTGATCGGGCTATCCCTGCTGCAAATATTGACTTGCATTATGCTCATTGTTCTCGGAACCTTGAGAAATGCAAAGTTTGTGGTGATATGATTCCCAGAAAAACTGCAGAGGATCACTATTTAAGCACCCATGCGCCTGTTTCTTGTTCATTATGCAGTGAGACAATGGAGCGTGATATTTTAGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATTGTGACTTGTGAGTTCTGCGAGTTTCCATTGCCAGCAATTGATCTGGCCGAACATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTTCGTGAAAGGTTCAGCCATGAAGCTCGGTGCAATGGCATCCAAGATAGTGCTGTCACTTCTGTGGGCCCTTCAAGGAATGTGAGGGAAGCTGAGAGAGAGGAAGGTCCTCGAAGGAGGCAGAATGACTTCTCAACTGGACGCCTTCTTTTCACAATAGCCATCACTGGTATTGCTGTCATACTGGGATCATTTTTTCTACAGAGGAAGGCAGAGCCCAGTGATGTGCATTAG 606 0.4488 MEGVSDQGTSTCSHCDRAIPAANIDLHYAHCSRNLEKCKVCGDMIPRKTAEDHYLSTHAPVSCSLCSETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERFSHEARCNGIQDSAVTSVGPSRNVREAEREEGPRRRQNDFSTGRLLFTIAITGIAVILGSFFLQRKAEPSDVH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01150 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Cca05g01150 201 MobiDBLite consensus disorder prediction 151 165 - -
Cca05g01150 201 MobiDBLite consensus disorder prediction 144 165 - -
Cca05g01150 201 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 4 201 - -
Cca05g01150 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 57 IPR013083 -
Cca05g01150 201 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01150 Cca-Chr5 28867461 28874080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01150 - - ccaj:109808130 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01150 05 28867461 28874080 Cca05g01150 05 28867461 28874080 ECH