Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01138 atggaagaagaaAGCCTTTCGATGATCTCAACGGTGGTGCCTGCGACCCATCAAAGCGACGAAAACGGCGTGTGCCAGCTCAGCTCCATGGACCTCCTCATGAAGCTCCACTACATCAGAGCCGTTTATTTCTTCACCAGCGACGCGGCCCAAGGCCTCTCCATGGCGGACCTCAAGAAGCCCATGTTCCTCCTCCTGGACCAGGCCACGCGAGCGATATCGGGTCGGGTCAGGATTTCCGAATCGGGTCGAGCATTCGTAAAGTGCAACGACGCTGGCGTGCGCATCGCTGAGTCACGCCGCGACCGCACCCTTCAGGAATGGTTCCAACAACACGGGTGCTCCCTCGAAGGCCTTGTACACGATCACGTCCTTGGTGGACCTGACCTTGGCTTCTCTCCTTTGGCTGTTGTCAAGTTCACTTGGTTTAAATGTGGAGGGTTGTGTGTGGGACTCAGCTGGTCCCATATCCTGGGAGACGCATTTTCAGCCTTCGACTTCATCACCAAGTGGAGTCAAATACTCGCAGGTCAAactcacactcacactcacactcacactcacGCGCCACCAAAACCGAAACCCCTTCCCACGCCAATTCATAAACAAACCCAATCCCCACCACACAACAATGATCCCATTTCCGTTAAAATGACCACGACCGCAGGGGAATTCTGGCTCCCCACAAACCACGCCAAAATCGCCACCCACTCGTTCCACGTCACTTCCAAACAACTCAACCGTTTAGTAACAACATCCACGTGTCACCAAAACGACGCCGCGGAAACCTCGTACTTCGGAACCCTCTCCGCGCTGGTGTGGAAACACGTGGCCCGCATCAGGGGAGAGTCCGAGCCCAGGGCCGTGACGATTTTTACACGTGGCGGCGAGGGATTGGAGGTGAGCGCGGTGGAAGCGAGCTTCGTGGTTGCGACATCCGACGTGGCGGATTTGGCGAGGGTGATTGGGGCGGAGAGGAGGGTTGATGACGTGGCAAAGTTGGTGGAAGAGAGCGGAGGGAAAGGGGATTTTGTGGTGTACGGAGCGAATTTGACGTTGGTGGATTTGGAGAATGGTGGTGACGTGTATGGGGTGGTGCTGAATGGACACAAACCGGTGTTGGCGAATTGTTGCATCCATGGGGTGGGTGATGACGGTGTCGTTTTGGTGCTTCCGGCGCCGGAGGGTTTCACTGGTGGAAGAATGGTCACGGTTTCTCTGCCTGATAAGGAGCTTCTACAGCTGAAAGATAATCTGAGAGATGAATGGGGAATTGAGTCGCTTTCATTTTCATGA 1296 0.5347 MEEESLSMISTVVPATHQSDENGVCQLSSMDLLMKLHYIRAVYFFTSDAAQGLSMADLKKPMFLLLDQATRAISGRVRISESGRAFVKCNDAGVRIAESRRDRTLQEWFQQHGCSLEGLVHDHVLGGPDLGFSPLAVVKFTWFKCGGLCVGLSWSHILGDAFSAFDFITKWSQILAGQTHTHTHTHTHAPPKPKPLPTPIHKQTQSPPHNNDPISVKMTTTAGEFWLPTNHAKIATHSFHVTSKQLNRLVTTSTCHQNDAAETSYFGTLSALVWKHVARIRGESEPRAVTIFTRGGEGLEVSAVEASFVVATSDVADLARVIGAERRVDDVAKLVEESGGKGDFVVYGANLTLVDLENGGDVYGVVLNGHKPVLANCCIHGVGDDGVVLVLPAPEGFTGGRMVTVSLPDKELLQLKDNLRDEWGIESLSFS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01138 431 Gene3D - 217 296 IPR023213 -
Cca05g01138 431 MobiDBLite consensus disorder prediction 179 214 - -
Cca05g01138 431 Pfam Transferase family 11 285 - -
Cca05g01138 431 PANTHER PROTEIN ECERIFERUM 2 8 423 - -
Cca05g01138 431 Gene3D - 6 211 IPR023213 -
Cca05g01138 431 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01138 Cca-Chr5 28643132 28645560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01138 9 419 Acyl Lipid Metabolism Gene Families AT4G24510 38.515 2.41e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01138 - - ccaj:109814991 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01138 05 28643132 28645560 Cca05g01138 05 28643132 28645560 ECH