Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01132 ATGGAGAATTCCGAATCGGCGCAGAGCGTGCGGGTTGCCGTCAACATTCGGCCTCTGATCACGTCGGAGCTTATGCTCGGGTGCACAGATTGCATCTCCGTCGTCCCTGGTGAACCTCAGGTGCAAATTGGGTCACACGCTTTCACTTATGACTATGTTTATGGTAGTACGGGATCTCGGTCGTCTGCAATATACGATGATTGCGTAGCTCCACTTGTAGATGCGCTTTTCAATGGCTACAATGCAACCGTTCTTGCGTATGGCCAGACTGGATCTGGGAAGACATACACCATGGGCACCAACTATACTGGAGAGGAAAATGCGGGTGGAATTATACCCAAGGTGATGGAGACAATATTCAAGAGGGTTCAGACTATGAAGGAATCTTCAGAGTTTTTGATTAGGGTATCTTTTATCGAGATATTCAAGGAAGAGGTATTTGATTTGCTTGATCCCAGTTCAGCTAGAGGAGATGCGGCTGCTACTGGGAAGGCCGCTGCTCCCAGCAGAGTTCCCATACAAATTAGAGAAACAGTGAATGGAGGAATAACACTGGCTGGTGTGACCGAGGCCGAAGTTAAGACTAAAGAAGAAATGTCATCTTATCTTTCTCGAGGTTCACTGTCACGTGCGACTGGGAGTACGAACATGAACAGTCAATCAAGTCGGTCACATGCAATATTCACAATAACAATGGAGCAAAAGAGTGGTGATGATGTCTTGTGTGCAAAACTACACTTGGTGGACCTTGCTGGTTCTGAACGTGCAAAAAGAACTGGCGCAGATGGCATGCGTTTAAAAGAAGATGAGGAAGATCATGCAAAGGAGATAGAACACTCTTCTCTTCAAGAAAAGTTGGGTAGGGAGCTCAAAGAATTGGATAAGAAACTTGAACAAAAAGAGGCTGATTTGAAGAAGTATAGTCATGAGCAAGAGTTTGAAAAAAAAATTCTTGAGTTAGAACAAGAGAAGAAATTTTTGCAGAAAGAAATTGAGGAACTTAGGTACAATCTTGCAAATATTTCATCCACCTCTGATGATGGTGCTCAAAAGTTAAAGGCGGAATATCTTCAGAAGTTAAATGCTCTTGAGGCACAGGTCTCTGAGTTGAAGAAGAAACAAGAAGCTCAGGCTCATCTGTTGAAACAAAAACAGAAAAGTGATGAGGCTGCAAAACGACTTCAGGATGAAATCCACAGAATTAAATCTCAAAAGGTTCAATTGCAACATAAGATTAAGCAGGAATCAGAACAATTTAGGCTATGGAAAGCTTCGCGTGAGAAGGAAGTTCTCCAGCTTAAAAAAGAAGGAAGGAGGAATGAATATGAGATGCATAAGCTGTTAGCGTTGAATCAGAGGCAAAAGATGGTATTGCAAAGGAAGACAGAAGAAGCTTCCTTAGCCACAAAAAGGCTAAAAGAACTTTTGGAATCTCGAAAGACTTCACGCGAAACTACAGTTCCTTTTTTACACACAGGTGGGAATGGTCCAGGAATTCAGGCTTTGATGCAGGCAATTGAGCATGAGCTTGAAGTCACAGTCCGAGTGCACGAAGTACGCTCAGCACATGAGCGTCAAACAGAAGAGAGGACTAAAATGGCCAAGGAGATTGCAAGATTAAAGGAAGAAGCAGATATGATGAAGTTAAACAATTCAAGTGATGGCCTCGTATCAATGTCTCCGGGAGCAAGAAATTCAAGGATATATGCCCTCGATAAGATGATTGCTTCTTCTTCTACAACACTGCTAACAATGGCGTCTCAGTTGTCAGAGGCAGAAGAGCGGGAACGGGTTTTCAGTGGCAAGGGGCGTTGGAACCAAGTCCGTTCCCTTTCTGAAGCCAAGAATTTGATGAATCATTTGTTTAATCTGGCATCTTCCTCCAGGTGTTCATTGCGAGATAGAGAAGTTGCCTGCAGGGAGAAGGACATGGAAATAAGAGATATGAAAGAAAAAGTAGTAAGGTTGAGCTGTTCACTTCGACAGTTGGAAATGCAGAAGTCTGAACTCATTCATCAGTTGAAGTTGCTGAGGGCAAAGAGGTACTCAGAATCTGTGGGGGATTCGGTGTATTACACAACTGGTGTAGGACATAAGTATGACTTGCGCAAGATGGAAAACCGGCGATCTACAATTTTATTGGAGGATATGGATTTATCAATATCAGACACAGAAGCAGATGATTATGCTAAAAATGGGACTGATGATGAATGGGTAGCATCAGAAGATGATGAATGCGTAGCATCAGAAAAAATACATGTTAGGAAAAGAAAGTCTAAGAGCAGACGTGCAAGCATGGAAGACAATCAGTCAAATATCAGTTCAGAAGATGTAAAAGATAATTCAACAGAAGCAAATGGAGGTGCATCTGGGGAAACTGCATCAGGAATCTGCTGCTCTTGTAGTAAATCTTCTTCTTGCAAGACAAACAAATGCAAGTGCAAAGCTCTGGGCGGCACTTGTGGGAGTTCTTGTGGTTGCTTAGCATCCAAGTGTGCCAACAGAATATCAGTCTCGAATGAGTCACAAGTTGAAGGGACTGGTAATGATTCCAGTATTGAGGAATCAAACAAAGATCGCCTTCTTGCTGCTCAAGGGGCTGAATTGCTTCACGGTGCACTGGTTGAGGGGCCTGCTGAAGCCCACAGTGATCATGGGCCAAGAAAACCTCTTTCTGATATTGGAAATACACTGGCCAAATCAAATGCTCAGAAGGCTAATCCAAGAAAGAAATGGGGGAAGGTGAAGCCCCCAGTACTTGTTGTTACAGATCCTCCACCTTCCTCTGAAGATAATTCTGAAGTCCCCAAGAAAGAAGATAATAGCATCAATGAAGCGAACATACCACTGAAAATGCACTCATCTAGACCTGAAAACTCTTTGGTTGCCCCTAAGGTAGAGAAAAATATAATTGACACAGATATACCTTTGAAAATACCTCGAGCTATGCGAAAGCAAGCATCATCAAATGGTGGTGGCCTTCCACTGGGGGACATGAACGCTGGTAAGCCAGATGAATCTGTCACAAAGAAGGAGTCTGAAGTGATTGAAGCTAGAAGTCCCGTGAAACAAAAAAGAACATTTGAGAAAGAGAACAATGGACGTTAA 3108 0.4302 MENSESAQSVRVAVNIRPLITSELMLGCTDCISVVPGEPQVQIGSHAFTYDYVYGSTGSRSSAIYDDCVAPLVDALFNGYNATVLAYGQTGSGKTYTMGTNYTGEENAGGIIPKVMETIFKRVQTMKESSEFLIRVSFIEIFKEEVFDLLDPSSARGDAAATGKAAAPSRVPIQIRETVNGGITLAGVTEAEVKTKEEMSSYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKSGDDVLCAKLHLVDLAGSERAKRTGADGMRLKEDEEDHAKEIEHSSLQEKLGRELKELDKKLEQKEADLKKYSHEQEFEKKILELEQEKKFLQKEIEELRYNLANISSTSDDGAQKLKAEYLQKLNALEAQVSELKKKQEAQAHLLKQKQKSDEAAKRLQDEIHRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASLATKRLKELLESRKTSRETTVPFLHTGGNGPGIQALMQAIEHELEVTVRVHEVRSAHERQTEERTKMAKEIARLKEEADMMKLNNSSDGLVSMSPGARNSRIYALDKMIASSSTTLLTMASQLSEAEERERVFSGKGRWNQVRSLSEAKNLMNHLFNLASSSRCSLRDREVACREKDMEIRDMKEKVVRLSCSLRQLEMQKSELIHQLKLLRAKRYSESVGDSVYYTTGVGHKYDLRKMENRRSTILLEDMDLSISDTEADDYAKNGTDDEWVASEDDECVASEKIHVRKRKSKSRRASMEDNQSNISSEDVKDNSTEANGGASGETASGICCSCSKSSSCKTNKCKCKALGGTCGSSCGCLASKCANRISVSNESQVEGTGNDSSIEESNKDRLLAAQGAELLHGALVEGPAEAHSDHGPRKPLSDIGNTLAKSNAQKANPRKKWGKVKPPVLVVTDPPPSSEDNSEVPKKEDNSINEANIPLKMHSSRPENSLVAPKVEKNIIDTDIPLKIPRAMRKQASSNGGGLPLGDMNAGKPDESVTKKESEVIEARSPVKQKRTFEKENNGR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01132 1035 Coils Coil 523 550 - -
Cca05g01132 1035 Pfam Kinesin motor domain 41 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01132 1035 ProSiteProfiles Kinesin motor domain profile. 9 268 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01132 1035 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 7 268 - -
Cca05g01132 1035 SMART kinesin_4 7 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01132 1035 Coils Coil 646 680 - -
Cca05g01132 1035 Coils Coil 353 380 - -
Cca05g01132 1035 Coils Coil 458 478 - -
Cca05g01132 1035 Coils Coil 384 418 - -
Cca05g01132 1035 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca05g01132 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 268 IPR027417 -
Cca05g01132 1035 MobiDBLite consensus disorder prediction 901 943 - -
Cca05g01132 1035 Coils Coil 283 344 - -
Cca05g01132 1035 Gene3D Kinesin motor domain 1 302 IPR036961 -
Cca05g01132 1035 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 269 1009 - -
Cca05g01132 1035 PRINTS Kinesin heavy chain signature 215 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01132 1035 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01132 1035 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01132 1035 MobiDBLite consensus disorder prediction 981 1035 - -
Cca05g01132 1035 SMART CXC_2 794 838 IPR033467 -
Cca05g01132 1035 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 7 268 - -
Cca05g01132 1035 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 269 1009 - -
Cca05g01132 1035 MobiDBLite consensus disorder prediction 766 795 - -
Cca05g01132 1035 MobiDBLite consensus disorder prediction 1004 1035 - -
Cca05g01132 1035 MobiDBLite consensus disorder prediction 757 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01132 Cca-Chr5 28559665 28588833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01132 9 268 Miscellaneous Gene Families AT2G21380 35.821 1.25e-33 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01132 - - ccaj:109815009 1859.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01132 05 28559665 28588833 Cca05g01132 05 28559665 28588833 ECH