Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01128 ATGGTTTGGCCAATTAGGTCCAGAATAAGTTCACTTCTCTGTTCAAAGGCACCTTTGGTGGGTTCATACGTCTATGACTCATGGTGGTGCTCACGCTTTTCTGTTCAACGGCCTTGGCCAAAATTTATGGATTGTGTAAAAACGGACCGTTGCCGTGCAGCAGCATCGTTGCCTTGGTTAAAGGAGAAACAGCCAGAGGATCCTGGTATTTGTGTCAGACTCGGTCGAGAAAACAAAGGTCTTGATGAAGGGAATATGGCTGAAATTGATGGCTATCAAAATTTGTTTGGTTTGATGAAACAGAGATTTCTGAATTTCAAGAACCAAAAATACAGAAAAGAGTTGGAGCATTTTCAAGCTCTTGCTGAAGCTCAGTATCCCAAGTTTATGGTAATTGCTTGTGCAGACTCTAGGGTATGCCCCTCTAACATATTAGGGTTCCAACCTGGAGAAGTCTTTATGATACGCAACGTTGCCAATCTTGTACCTGGAATGAAGAATGGAGCATCAGAATGTAATGCTGCTCTTGAGTTTGCAGTAACTACTCTTAAGGTTGAGAATATATTAGTCATTGGTCACAGTAGGTGTGCTGGAATTGAAACTTTGATGAATATGCCAGAAGATGTAGAATCAAGAGTTCATCCATCCTCTAGAAACTTCATACACAAGTGGGTTGCCAATGGAAAACTTGCCAAACTGAGGACAAAAGCTGCTACAGCTCATCTTAGCTTTGATCAGCAATGCAGATTCTGTGAGAAGGAATCTATCAACCAATCATTATTGAACTTGCTGAGTTATCCTTGGATAGAAGATAGAGTGAGAAGAGAGCTGCTTTCTCTTCATGGAGGACATTATAATTTCTCCAATTGCTCGTTTGAGAAATGGACTCTTGATTTCAAAGCATGCAATTTGCGAGAAGAAGGAAGCAGTTATGTTGTCAAAGAACAAGAATTCTGGTGCTGA 963 0.4091 MVWPIRSRISSLLCSKAPLVGSYVYDSWWCSRFSVQRPWPKFMDCVKTDRCRAAASLPWLKEKQPEDPGICVRLGRENKGLDEGNMAEIDGYQNLFGLMKQRFLNFKNQKYRKELEHFQALAEAQYPKFMVIACADSRVCPSNILGFQPGEVFMIRNVANLVPGMKNGASECNAALEFAVTTLKVENILVIGHSRCAGIETLMNMPEDVESRVHPSSRNFIHKWVANGKLAKLRTKAATAHLSFDQQCRFCEKESINQSLLNLLSYPWIEDRVRRELLSLHGGHYNFSNCSFEKWTLDFKACNLREEGSSYVVKEQEFWC 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01128 320 PANTHER CARBONIC ANHYDRASE 4 320 IPR001765 GO:0004089|GO:0008270
Cca05g01128 320 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 134 141 IPR015892 GO:0004089|GO:0008270|GO:0015976
Cca05g01128 320 SUPERFAMILY beta-carbonic anhydrase, cab 92 301 IPR036874 GO:0004089|GO:0008270
Cca05g01128 320 Gene3D Carbonic anhydrase 92 304 IPR036874 GO:0004089|GO:0008270
Cca05g01128 320 PANTHER CARBONIC ANHYDRASE 4 320 - -
Cca05g01128 320 Pfam Carbonic anhydrase 130 289 IPR001765 GO:0004089|GO:0008270
Cca05g01128 320 SMART Pro_CA_2 122 296 IPR001765 GO:0004089|GO:0008270
Cca05g01128 320 CDD beta_CA_cladeB 102 295 IPR045066 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01128 Cca-Chr5 28504602 28507638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01128 K01673 - gmx:100812124 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01128 05 28504602 28507638 Cca05g01128 05 28504602 28507638 ECH