Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01115 ATGGACCTTGGGGCCTCCGATCCGAACCCGGTTCGGGTGAAGCGGAAAACCCTAGAAGCCGTCCTCGAACAGTGTCAGAGAGCGCTTGAACTTCTCAATGCTTCCGATGaacaacaacaacaacaacaacaagacgacgacgacgacTCTCAGGAATCGCCTCCTTCCACGCGCCCCGATCCGGAAACGGATCAGTTGTGTGACTTGCTCAAGTCTAGAGTTGAATGCCCGGACTTCCTTGAGAAGTTGGAGTATGCACAGGCGTCAGTTTTGCACAACTCAGCTGAAGAAGGTAATTCTTGGGATTTTGTTAGCAAAAATGATCTTTGGGAAGGTGAAGATGCTGACTTAGACCAAGAAGATTACGTCCTTGTTAGACAAGAAGATATAGTGGAAGGAATTGCATGTTTCATGGCTGCGTATTTGTTGTCACTGAAGCAAACCAAGGATTTGACGCCAAATCAACTCCAGGATGCTCTCAGCAAGACATTTTCTGTGAAAAAGAAAAAGGGAAAGCTTCGAAAGGCATGGGATGGGAGCAAAGTTATTTATAATGTTGCATCATGGGGAGCTACAGCCATTGGGATATATCAGAATCCTGTTATTGTAAGCGTTGCAAGTAAAGCATTCTGGACTTCTTGTCAAGTTATATCGAAGCTACTCTGA 666 0.4309 MDLGASDPNPVRVKRKTLEAVLEQCQRALELLNASDEQQQQQQQDDDDDSQESPPSTRPDPETDQLCDLLKSRVECPDFLEKLEYAQASVLHNSAEEGNSWDFVSKNDLWEGEDADLDQEDYVLVRQEDIVEGIACFMAAYLLSLKQTKDLTPNQLQDALSKTFSVKKKKGKLRKAWDGSKVIYNVASWGATAIGIYQNPVIVSVASKAFWTSCQVISKLL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01115 221 PANTHER RING FINGER PROTEIN 7 221 - -
Cca05g01115 221 PANTHER RING FINGER PROTEIN 7 221 - -
Cca05g01115 221 Coils Coil 15 42 - -
Cca05g01115 221 MobiDBLite consensus disorder prediction 31 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01115 Cca-Chr5 28388330 28392295 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01115 - - gmx:100790753 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01115 05 28388330 28392295 Cca05g01115 05 28388330 28392295 ECH