Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01113 ATGGCCTCAATCTCAGGCATTTGCTCCTCCTCCCCCACTCTCAACCACCAAAACCACTCCAACCCAATACGACGCCGCATCGCGCTCCCCTCATTCCCGCTTCGCGCCAAACCCACCCCGCCGCGCTCCCTCGCGCGTGAGGCTCCCGCGCACCTCTCCGCGCTCCCCGCCAAACGCGTCAACGAAAAAGACCCACGCGCGCTATGGCACCGCTACGTGGAGTGGCTCTACCAGCACAAGGACCTGGGGCTCTACCTCGACGTCAGTCGGGTTGGCTTCAACGACGACTTCGTGCGCGAAATGGAGCCCCGGTTGGAGGCGGCGCTGCGCGCCATGGAGGAGCTCGAGAGGGGCGCCATCGCCAACCCCGACGAGGGCCGCATGGTCGGCCACTATTGGCTCAGGGACTCCGCGCGCGCTCCCACCTCGTTCCTCAAGGCGCAGATTGATAACACGCTCGACGCCATTTGCAGCTTCGCCGACGACGTGGTCACCGGTAAGATTACACCGCCGTCGTCGCCGGAGGGGAGGTTTACGCAGATACTTTCTGTTGGGATCGGAGGTTCCGCGCTTGGGCCGCAGTTTGTCGCGGAAGCGCTGGCTCCTGATAATCCTCCGCTCAAGATAAGATTTATTGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGCCCTGAGCTAGCTTCGACGCTTGTGATAGTAATTTCGAAGAGTGGAGGTACCCCTGAGACTAGAAATGGCTTATTAGAAGTACAGAAAGCATTTCGTGAAGCAGGATTGAATTTCCCAAAACAGGGTGTTGCTATAACGCAAGAAAATTCTTTGTTAGATAACACTGCAAGAATTGAGGGCTGGTTGGCTAGATTTCCAATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTTGGCCTGCTTCCGGCAGCCCTTCAGAGCATTGACATCAGAGAAATGCTTGCTGGTGCAGCGTTAATGGATGAGGCGAATAGGAGTACTGTGATAAGGAATAATCCTGCAGCTTTGCTGGCCTTGTGTTGGTATTGGGCTACGGATGGTGTAGGATCGAAGGATATGGTTATCCTTCCGTATAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAGTTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATCAGTGTCTATGGAAATAAAGGAAGCACAGATCAGCATGCTTACATTCAGCAACTGAGGGAAGGTGTGCACAATTTTTTTGTGACATTCATTGAGGTGCTACGTGATAGACCACCTGGTCACGATTGGGAGCTTGAACCAGGTGTCACATGTGGCGATTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCCCTGTATGCCAATAACCGCGAATCCATCACAGTTACGGTGCAAGAAGTGACACCCAGATCAGTTGGCGCCCTTATTGCACTTTACGAACGGGCAGTTGGAATATATGCCTCACTTGTTAACATAAATGCTTATCACCAACCTGGTGTGGAAGCTGGTAAGAAAGCTGCGGGAGAAGTATTAGCACTTCAGAAGCGGGTATTGGCAGTGCTAAATGAAGCAAGTTGTAAGGAGCCTGTCGAACCATTAACGCTTGAAGAAGTAGCTGACCGTTGTCATGCCCCAGAAGATATTGAAATGATTTACAAGATCATTGCTCATATGGCTGCCAACGACAGAGCACTGATTGCTGAAGGTAACTGTGGTTCTCCCCGGAGCATCAAGGTTTTTCTTGGGGAGTGTAATCTTGATGAACTTTATGCTTGA 1824 0.5159 MASISGICSSSPTLNHQNHSNPIRRRIALPSFPLRAKPTPPRSLAREAPAHLSALPAKRVNEKDPRALWHRYVEWLYQHKDLGLYLDVSRVGFNDDFVREMEPRLEAALRAMEELERGAIANPDEGRMVGHYWLRDSARAPTSFLKAQIDNTLDAICSFADDVVTGKITPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLNFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMLAGAALMDEANRSTVIRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGNCGSPRSIKVFLGECNLDELYA 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01113 607 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 607 - -
Cca05g01113 607 Gene3D - 172 312 - -
Cca05g01113 607 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 607 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 29 536 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 Gene3D - 313 512 - -
Cca05g01113 607 SUPERFAMILY SIS domain 54 530 IPR046348 GO:0097367|GO:1901135
Cca05g01113 607 ProSitePatterns Phosphoglucose isomerase signature 2. 503 520 IPR018189 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 MobiDBLite consensus disorder prediction 31 50 - -
Cca05g01113 607 Hamap Glucose-6-phosphate isomerase [pgi]. 81 530 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 Pfam Phosphoglucose isomerase 110 437 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 Pfam Phosphoglucose isomerase 468 528 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 CDD SIS_PGI_2 362 526 IPR035482 -
Cca05g01113 607 MobiDBLite consensus disorder prediction 1 21 - -
Cca05g01113 607 PRINTS Glucose-6-phosphate isomerase signature 181 200 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 PRINTS Glucose-6-phosphate isomerase signature 293 311 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 PRINTS Glucose-6-phosphate isomerase signature 369 390 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 PRINTS Glucose-6-phosphate isomerase signature 471 489 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 PRINTS Glucose-6-phosphate isomerase signature 489 503 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 PRINTS Glucose-6-phosphate isomerase signature 503 516 IPR001672 GO:0004347|GO:0006094|GO:0006096
Cca05g01113 607 Gene3D - 43 171 - -
Cca05g01113 607 CDD SIS_PGI_1 150 316 IPR035476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01113 Cca-Chr5 28366060 28373897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01113 K01810 - gmx:100809452 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01113 05 28366060 28373897 Cca05g01113 05 28366060 28373897 ECH