Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01093 ATGTTTAGCGTTAAGGAATTAGTGGAATCGAATTGTCTGAGGTCTGTTCCCTTGAACTATGTTTGCCTTGAAAACCCCCAAGATTCCTCATTGTATTGTGAAAACGAGAATGTTCCCACCATTGATTTTTCTCAACTCACCTCTTCCAATCTCAGTGAACGCTCCAAGGCAATCCAACAACTAGGCGATGCTTGCCGAGATTGGGGTTTCTTTATGCTAATAAATCACGGTGTATCGGAGACACTAAGGGATGAGGTACTTAGGGCAAGCCAGAAGTTTTTTGATCTTACTGAGGAAGAAAAAAAGGAGTACGCAGGAGGGAAGTTATTTGATCCAATCAAATATGGGACAAGCTTCAATGTCATGGTTGACAAGACGCATTTCTGGAGAGATTATCTCAAATGTTATGTTCATCCTCACTTTAATGCTCCTTCCAAGCCTCCTGGTTTAAGCGAAACTTTAGAGGAATACTCCACAAAGGGCAGGGAAGTGATTGAAGAGTTGCTAAAAGGAATATCTCTAAGCTTATGCCTTGAAGAAAATTACATACACAGAAGGATGAAACTAGACTTAGGTTCGCAGTTGTTGGTTATCAACTGTTACCCTCCTTGTCCAAAGCCTGAACTTGTCATGGGCCTTCCAGCCCACACAGACCATGGGCTTCTGACCCTCCTTATGCAAAACGACCTTGCAGGGCTTCACATTCAACATAACGGCAAGTGGATTCCTATCCACCCTTTACCCAACTCCTTTCTCATCAACACTGGGGATCACATGGAGATTCTGACGAACGGCAAGTACAAGAGTGTGGTTCATCGTGCTGTAACGAATACGAAAGGCACTAGAATTTCCGTTGGTACAGCACACGGGCCCTGCCTTGATACCGATGTGGGGCCTGCACCGGAGATGGTTAGCGATGATAATCCCGCTGCATACCGTGCCATTAAATACAGAGATTACATGCAGCTTCAGCAAAACCATCAACTCGACGGAAAATCCTGCTTGGATCGTATTCGGACTTGA 1023 0.4457 MFSVKELVESNCLRSVPLNYVCLENPQDSSLYCENENVPTIDFSQLTSSNLSERSKAIQQLGDACRDWGFFMLINHGVSETLRDEVLRASQKFFDLTEEEKKEYAGGKLFDPIKYGTSFNVMVDKTHFWRDYLKCYVHPHFNAPSKPPGLSETLEEYSTKGREVIEELLKGISLSLCLEENYIHRRMKLDLGSQLLVINCYPPCPKPELVMGLPAHTDHGLLTLLMQNDLAGLHIQHNGKWIPIHPLPNSFLINTGDHMEILTNGKYKSVVHRAVTNTKGTRISVGTAHGPCLDTDVGPAPEMVSDDNPAAYRAIKYRDYMQLQQNHQLDGKSCLDRIRT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01093 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 142 IPR026992 -
Cca05g01093 340 PANTHER OS08G0480200 PROTEIN 20 336 - -
Cca05g01093 340 Pfam 2OG-Fe(II) oxygenase superfamily 194 286 IPR044861 -
Cca05g01093 340 Gene3D - 1 329 IPR027443 -
Cca05g01093 340 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 20 336 - -
Cca05g01093 340 SUPERFAMILY Clavaminate synthase-like 4 332 - -
Cca05g01093 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 291 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01093 Cca-Chr5 27958913 27962643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01093 4 339 Glycosyltransferase AT5G59530 30.904 5.01e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01093 - - gmx:100798911 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01093 05 27958913 27962643 Cca05g01093 05 27958913 27962643 ECH