Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01085 ATGGCAAATACAATCTTTACTCAAATGATTGCTTCCTTAGCTGTAGGAACATTCTCTAGATATCCGGCTTCAAATATTGTTAATCATTCCATTCATCACCTTCGATTCAACTCCAAGGTCAAGCGTAATCGCTTTTCAGTTCCAGAAAAGAACCTGAGCCTGAGATTTCAAAAAGATGCAACAAGAAAGATGAATATGGCTGTCTACTCTAGCATAACACCAGGAGATCCTGTTGATCCTTCTCCTGGTCATTGGAAAATTTGGATCCTTGGCACAATATTCACGATACTTGCATCCTTTACGAGGGGAAAATGGGGACCTTTGCTACAATTGAAGGAGAAAGTTGAAACAACAATAGACGAAGCAGAACGAGTGGTAGACGTTATAGAAGACGTGGCTGAGAAAGTGGATAAGGTGGCAGAAGAGGCTGTGAACCATCTTCCCAAGGGAAAACTTCGTGATGCTGCTGAATTTGTTGAAAAAGTAGCTGAGGATATAGATAACCATGCCCAACAAGCAGAAGAAGCATTAGAAAAGGTGGAAAACATAGAAAAGGAGTTCGAGTCCTTCATTGAATCAACCACTCATCAAGAAAATAGCACCACGGCGACTACAACAGCAAAGGAACATAAATAG 636 0.4088 MANTIFTQMIASLAVGTFSRYPASNIVNHSIHHLRFNSKVKRNRFSVPEKNLSLRFQKDATRKMNMAVYSSITPGDPVDPSPGHWKIWILGTIFTILASFTRGKWGPLLQLKEKVETTIDEAERVVDVIEDVAEKVDKVAEEAVNHLPKGKLRDAAEFVEKVAEDIDNHAQQAEEALEKVENIEKEFESFIESTTHQENSTTATTTAKEHK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01085 211 PANTHER PHAGE CAPSID SCAFFOLDING PROTEIN (GPO) SERINE PEPTIDASE 1 204 - -
Cca05g01085 211 Coils Coil 156 193 - -
Cca05g01085 211 PANTHER EXPRESSED PROTEIN 1 204 - -
Cca05g01085 211 Coils Coil 112 132 - -
Cca05g01085 211 MobiDBLite consensus disorder prediction 191 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01085 Cca-Chr5 27822230 27824155 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01085 - - gmx:100797309 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01085 05 27822230 27824155 Cca05g01085 05 27822230 27824155 ECH