Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01062 ATGAGTCAGTGCCTGTTCAGCATTACCGAAACCAGAAACCGGTGCTACCGGTCAGCGTTCTCCGGTTCGGGCCTCCGGTCCACGGTTACCGACTTGAAAGACGGAACCGTAATGCATTGCTGGGTGCCGAAGGCGCGAAGAGAGGCCAAGCCGAACCTGGTTCTGATCCACGGCTTCGGAGCCAACGCGCTGTGGCAATGGGGGCACCTAATCCGCCACGTGACGCCGCATTTCAACGTGTACGTGCCGGACCTCGTTTTCTTCGGCGGCTCCTACTCGTCGCGGCCCGAGCGGAGCGAGCGCTTCCAGGCGGAGTGCGTGGTGCGGGTGATGGAGGCGCAGGGGGTGCGGCGGGTGAGTTTAGTGGGGTTTAGTTACGGCGGCTTTGTCGGGTACTGTATGGCGGCGATGTGCGGAGAGGTGGTGGAGAGGGTGGTGGTGTGTGGCTCCGGGGTGTGTATGGAGGAGAGGGATCTTAAGGAAGGGCTTTTCCCTGTGACGGATTTGGATGAGGCTGCTAATATTTTGGTGCCACGAACGCCCAATAAGCTCGTGCAGCTTGTCCGCTATACCTTTTTCAAGCCACCTCCCTTGACCTGGTTGCCCTCATGCTTCCTCCTTGATTTCATTGAGTGGATTAAATTGGTGAATCTGGGTAGACAATGTGCAGGGACTATGAACAAGAAAAGAGAGAATTGA 699 0.5722 MSQCLFSITETRNRCYRSAFSGSGLRSTVTDLKDGTVMHCWVPKARREAKPNLVLIHGFGANALWQWGHLIRHVTPHFNVYVPDLVFFGGSYSSRPERSERFQAECVVRVMEAQGVRRVSLVGFSYGGFVGYCMAAMCGEVVERVVVCGSGVCMEERDLKEGLFPVTDLDEAANILVPRTPNKLVQLVRYTFFKPPPLTWLPSCFLLDFIEWIKLVNLGRQCAGTMNKKREN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01062 232 SUPERFAMILY alpha/beta-Hydrolases 27 200 IPR029058 -
Cca05g01062 232 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 213 - -
Cca05g01062 232 Gene3D alpha/beta hydrolase 11 225 IPR029058 -
Cca05g01062 232 Pfam alpha/beta hydrolase fold 51 156 IPR000073 -
Cca05g01062 232 PANTHER SI:DKEY-122A22.2 5 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01062 Cca-Chr5 27398115 27401496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01062 - - ccaj:109809309 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01062 05 27398115 27401496 Cca05g01062 05 27398115 27401496 ECH