Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01053 ATGAAGAGAGAAACGCTGACGCTGCTGCTCGTCAACCTCGCCGGGATAATGGAGAGAGCCGACGAGTCTCTTCTTCCGGGAGTCTACCGAGAGGTAGCTTTATCGCGAGCATTTAATGGAATTGGTCTTGCACTTGTAGCACCGGCAATTCAGTCCCTTGTTGCCGACTCAACCGATGATACCAACCGTGGCACGGCTTTTGGGTGGCTTCAACTGACAGCCAATGTTGGTTCAATTATCGGTGGTCTTTTCTCGGTCTTGATAGCTCCGATAACGGTCTTTGGCATCCCTGGTTGGAGAATTTCCTTTCATATTGTTGGACTAATAAGCATTGTAGTAGGTGCTTTAGTATACCTCTTTGCCAATGATCCCCACTTCTCGGATAATGCTACAAATCATAGCAGGGAGGCTCCAAATAAAACGTTTTGGTCTCAAGTGAAAGATCTGGTTCAGGAATCCAAGTCAGTTTTGAAGATTTCATCTTTCCAGATTATTGTTGCACAGGGTGTCACTGGCTCCTTTCCCTGGTCTGCTTTGTCATTTGCACCAATGTGGTTAGAGCTTATCGGGTTCTCGCATCAGAAAACTGCTTTCCTCATAGGTTTGTTTGTGGTTGCCAGTTCTATTGGGGGGTTGTTTGGGGGTAAGATGGGAGATATCCTCTCCAAGCGTTTTCCAAATTCTGGAAGGATAATTCTGGCACAGATAAGCTCTGGATCGGCAATCCCCCTAGCAGCACTTCTTTTGCTCGGTTTACCTGATGATCCATCCACAATAATATCTCATGGTTTGCTTCTAATCATTATGGGCCTCATGATATCTTGGAATGCTCCCGCTACAAATAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCCCGAACAAGTGTATATGCCTTGGACCGATCTTTTGAATCTATACTATCATCCTTTGCCCCCCCTGCAGTGGGAATTTTGGCTCAGCATGTTTATGGGTATAAACCCATTCCTAAAGGATCAAGTGAATCTCAAGAGATTTTAACAGACAGAGAGAACGCTGCATCATTGGCCAAGTCTCTTTACACAGCAATAGGAATTCCAATGGCTCTCTGTTGTATAATCTACACACTTCTTTATAGAACATATCCAAGAGACAGGGAACGAGCTCAGATGGAGGCTTTAATAGAATCAGAGATGCAACAAATTGAATTAGATGGTTTAGCCATGGAGTTTGAGTCAGAAGAATTGTCTATTGCAGATTATGATGGTGGTGATGAAGAGAACACATTACTCTACCGGCAGTTGACACCTTCCAAAGAATAG 1302 0.4409 MKRETLTLLLVNLAGIMERADESLLPGVYREVALSRAFNGIGLALVAPAIQSLVADSTDDTNRGTAFGWLQLTANVGSIIGGLFSVLIAPITVFGIPGWRISFHIVGLISIVVGALVYLFANDPHFSDNATNHSREAPNKTFWSQVKDLVQESKSVLKISSFQIIVAQGVTGSFPWSALSFAPMWLELIGFSHQKTAFLIGLFVVASSIGGLFGGKMGDILSKRFPNSGRIILAQISSGSAIPLAALLLLGLPDDPSTIISHGLLLIIMGLMISWNAPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPIPKGSSESQEILTDRENAASLAKSLYTAIGIPMALCCIIYTLLYRTYPRDRERAQMEALIESEMQQIELDGLAMEFESEELSIADYDGGDEENTLLYRQLTPSKE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01053 433 SUPERFAMILY MFS general substrate transporter 33 378 IPR036259 -
Cca05g01053 433 Gene3D MFS general substrate transporter like domains 23 331 IPR036259 -
Cca05g01053 433 PANTHER SPINSTER 3 32 IPR044770 -
Cca05g01053 433 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 379 IPR020846 GO:0022857
Cca05g01053 433 Pfam Major Facilitator Superfamily 26 313 IPR011701 GO:0022857|GO:0055085
Cca05g01053 433 PANTHER OS09G0371000 PROTEIN 31 427 - -
Cca05g01053 433 PANTHER OS09G0371000 PROTEIN 3 32 - -
Cca05g01053 433 PANTHER SPINSTER 31 427 IPR044770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01053 Cca-Chr5 27282156 27285185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01053 - - gmx:100783378 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01053 05 27282156 27285185 Cca05g01053 05 27282156 27285185 ECH