Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01028 ATGGGGGCATCTCTGATGCAGGACAGGGATTTGAATCAATATAGACCATCATTGTCCAGCACCAGCAGGCACCTACCTTGTGGTCATCAGTTGTGTAATCAAAGTTCCCATTGCACAAGTTCTAAGGATCCCTGCCCTTACTTTGTTAAGTACTACTCAGATAATACCTCAAGTTCTGGATATCTTTTTGAAGACAAATTACATTTGGCGTCTGATGGCAGACATTCAATACAAAAATCTGTGCAAGCCTCTATCATTTTAGGTTGTGGAAGCAAACAAACTGGTGACTATTTACAGGGAGCTGCTCCTGATGGTCTTCTAGGGCTAGGAACTGGGAACATTTCAGTCCCAAGTTTGCTGGCAAAGGCAGGGCTTATTCAGAATTCCTTTTCAATTTGTTTCGATGAGAATGAATCTGGGAGAATTATCTTTGGCGACCAAGGTCATGTCACCCAACATTCTACATCATTCTTGCCTGAAGAGGGGGAATTTATAACCTATATAGTTGGAGTAGAGAGCTTTTGTGTTGGGAGCTTATGTCTCAAGGAAACCAAATTTAAAGCTGTTATTGACAGTGGATCTGGTTTCACATATCTTCCCAATAAAGTTTATCAAAAAGTTGTAACTGAGTTTGACAGACAAGTCAATTCAACCAGGATTATTTACCAACAACCCTCGTGGGAGTACTGCTATAGTGCAAGTTCACAGGAGTTGATCAACTTTCCCCCGTTGAAACTTGCTTTCTCTAGGAATCAAACTTTTTTAATTCAAAATCCCATGTTATTGTTTACTGGTTCTGTAAGTCAGGCATTCTAA 816 0.4032 MGASLMQDRDLNQYRPSLSSTSRHLPCGHQLCNQSSHCTSSKDPCPYFVKYYSDNTSSSGYLFEDKLHLASDGRHSIQKSVQASIILGCGSKQTGDYLQGAAPDGLLGLGTGNISVPSLLAKAGLIQNSFSICFDENESGRIIFGDQGHVTQHSTSFLPEEGEFITYIVGVESFCVGSLCLKETKFKAVIDSGSGFTYLPNKVYQKVVTEFDRQVNSTRIIYQQPSWEYCYSASSQELINFPPLKLAFSRNQTFLIQNPMLLFTGSVSQAF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01028 271 Gene3D Acid Proteases 147 268 IPR021109 -
Cca05g01028 271 Pfam Xylanase inhibitor C-terminal 183 258 IPR032799 -
Cca05g01028 271 Gene3D Acid Proteases 7 146 IPR021109 -
Cca05g01028 271 ProSiteProfiles Peptidase family A1 domain profile. 1 271 IPR033121 -
Cca05g01028 271 PANTHER ASPARTYL PROTEASES 8 264 IPR001461 GO:0004190|GO:0006508
Cca05g01028 271 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 264 - -
Cca05g01028 271 Pfam Xylanase inhibitor N-terminal 12 146 IPR032861 -
Cca05g01028 271 SUPERFAMILY Acid proteases 10 260 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01028 Cca-Chr5 26800893 26806612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01028 13 234 Miscellaneous Gene Families AT1G44130 25.862 2.70e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01028 - - lang:109359439 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01028 05 26800893 26806612 Cca05g01028 05 26800893 26806612 ECH