Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01016 ATGGAGGCGTGTCCCTCGTCGAACGCGAACACGGTGAGCGGGTTCTACACGTTCGTGAGCAGGGGCATGGAGGAGCTGGAGCGAGCGTTTCTGGCGAACAACTTGATGTCAATCCAGTTTCTTCAGAGGGTGCTGTCGCTCCTCCGATCGTTCCACACGCAACTCACGCTTCTGGTCCACAAGCTCCACCTTCCCCTCGGAGACAAGTGGCTCGATGAGTACATGGACGAAACCTCTAAGCTCTGGGAAACATGCCACCTCCTCAAGAACGCCATCTCCAACTTCGAACCTTTCTACTCTGCTGGCATCAACCTCGCCTCCTCCCTTGACTCTCACTCCCACCTCTCCCCACAGGTAGTGAGGGCGATATCTGGGTGTAGAAGGGAGGCTCTGGGGTTGGAGGAGCAGAACCGCGGTTTGATGGAGACGAGGATCCACACTTTGTGTCTACGTTTGGACGAGAGGGTGTCCGTGGAGTCGAAGCTGAACGGGTTCAACGGTTTCAGGGGCGTTCTCTACGCAATGAGGAACGTGAGTTCGATGCTGCTCATGATCCTGCTGCACGGCCTAGTCTACTGCTGGCCGGAGACATCGGAGCTGGTGGTGGGGGGGTACGAGGGGGGGAGGCTGTTTCTCGGGTCGGCGGTGGTGGTGGCGGCAACGAGGTTGCGGCAGAGGGTGGCGGCGGAGATCGGTGGGGCAGGGCCGGGGATTTTGCTCTACGAGTTCAGGAGGGCCAGGGTGGCGGTGGAGGAGCTCAGAGGGGAATTGGAGACAGAAAGAGTGGAGAGTGTTAGAGTATGTTTTGGGGTGCTTAGATCTGGTGCTGAGAACATAATTTGCCAGCTTGATGATTTCTTTGATGAGATTGTGGAGGGGAGGAAGAAGCTTTTGGATTTTTGCAGTCATAGCTTTAAAACAAAACAATAA 930 0.5602 MEACPSSNANTVSGFYTFVSRGMEELERAFLANNLMSIQFLQRVLSLLRSFHTQLTLLVHKLHLPLGDKWLDEYMDETSKLWETCHLLKNAISNFEPFYSAGINLASSLDSHSHLSPQVVRAISGCRREALGLEEQNRGLMETRIHTLCLRLDERVSVESKLNGFNGFRGVLYAMRNVSSMLLMILLHGLVYCWPETSELVVGGYEGGRLFLGSAVVVAATRLRQRVAAEIGGAGPGILLYEFRRARVAVEELRGELETERVESVRVCFGVLRSGAENIICQLDDFFDEIVEGRKKLLDFCSHSFKTKQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01016 309 PANTHER - 1 304 - -
Cca05g01016 309 PANTHER BPS1-LIKE PROTEIN 1 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01016 Cca-Chr5 26513003 26516730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01016 - - gmx:100805100 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01016 05 26513003 26516730 Cca05g01016 05 26513003 26516730 ECH
Cca05g01016 05 26513003 26516730 Cca03g01191 03 28454818 28457388 PCT