Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01004 ATGCGCGAGGCACTCGCCTGCGACCTCGCCAACGCCGCGCCGTCTCCTTCGCCGCCGGTTGTAGTGGCCGGACGGAGCCGCTCCCAGGGCTTCACGCGGCGGGTGACGCCGGCGGCGCTGCCGGCGGCGTCCGGATCCGCGGTGGAGCGCGTCCTCCCGAACGGCGACTTCTACGCCGGGAGCTTCTCCGGCAACGTCCCTCACGGATCGGGAAAATACCTCTGGACCGACGGGTGCATGTACGAGGGGGAGTGGAAGCGCGGAAAAGCCTCCGGGAAAGGAAAATTCTCGTGGCCTTCGGGCGCCACCTACGAGGGCGAGTTCAAATCTGGTCGAATGGAAGGCTTCGGAACCTTCGTCGGATCCGACGGCGACACCTACCGCGGCGCGTGGATTTCGGACAGGAAGCAGGGCTTCGGCCAGAAGCGCTACGCGAACGGTGATTTATACGAAGGTTGGTGGAAGCGCAACGTGCAGGACGGTCACGGCCGTTACGTCTGGCGAAACGGGAACGAGTACGTCGGGGAGTGGAAGAACGGCGTGATTAACGGGAAGGGCGCGTTGGTTTGGGCGAACGGGAACCGTTACGAGGGGCAGTGGGAGAACGGGGTGCCGAAGGGGCACGGCGTTATGAAGATTCAGCACCGTTTGCTTTGGGGCGAGAATTTGAACGGTGCGAGGAAACGGTCTTCGGTTGATGGGAGAGGGAGCGTTAATGAGAAGAGTTTCCCGAGGATTTGCATTTGGGAGTCGGAGGGTGAAGCGGGTGACATCACGTGTGATATAATCGATAATGTGGAGGCCTCAATGTTCTACCGCGACGGAACGACGTCGGATTGTGAAGATTCCAGGAGGAAAAGCCCCTGTTGTTTCTCCACCGAGGTTAAGAGACCTGGGGAAACAATTTCCAAGGGACATAAGAATTATGACTTGATGCTTAATTTGCAATTGGGGATAAGGTACTCTGTTGGGAAGGAGGCTTCCACGCTGCGAGAGCTTAAGCAGACTGATTTTGATCCCAAGGAGAAGTTCTGGACTAGGTTTCCGCCCGAGGGGTCGAAGATTACGCCGCCACATCAATCTGTGGAGTTTCGATGGAAGGATTACTGTCCTGTGGTTTTCAGGCATTTGCGGAAGCTGTTTCAGGTGGATCCTGCTGATTATATGTTGGCTATATGTGGGGATGATGCTCTGAGGGAGCTTTCGTCTCCTGGGAAGAGTGGAAGCATATTCTACTTGACCCAGGATGATAGATTCATGATAAAGACAGTGAAGAAATCTGAAGTCAAGGTGCTTATTCGGATGCTTCGGAGTTACTATCAACACGTATCCAGATATGAGAATTCATTTGTGACAAAATTCTATGGCGTGCACTGTGTCAAGCCAATTGGTGGCCAGAAGATCCGGTTCATTGTGATGGGCAATCTTTTCTGCTCTGAGTATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGCCGCACCACGGATAAACCTGAGGAGGACATTGATGAAACTACCACCCTCAAGGACCTTGATCTCAACTTTGTGTTTCGTGTGCAAAGGAATTGGTTCCAGGAACTCATCAAGCAAATTGAGTTGGACTGCGAGTTCTTGGAAGCTGAGAAAATTATGGATTACAGTCTTTTGGTTGGCATTCATTTTCGTGATGATACCCCGTGTGACAAAATGGGATTGTCACCTTTTCTTTTACGCACTGGCAATCGGGATTCCTATCAGAATGAAAAGCTCATGCGTGGTTACCGCTTTCTTGAAGCAGAGCTACAGGATAGAGATCGAGTTAAATCTGGAAGGAAATCATTAATTAGGCTAGGAGCCAATATGCCTGCAAGAGCAGAGCGAGTGGCCCGGAGGAGTGATTTTGATCAATACACCACTGCTGGAATCAGCCATTTGACCCCTTATCGCTGTGGGGAGACTTACGATGTCATTCTATATTTTGGAATCATTGACATTTTGCAAGATTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAGTCCTTGCAAGTTGACCCTACTTCAATTTCTGCTGTTGATCCCAAGCTCTACTCAAAGAGGTTTCGTGATTTTGTAGGGAGAATATTCATTGAAGAGAGGTAG 2130 0.5122 MREALACDLANAAPSPSPPVVVAGRSRSQGFTRRVTPAALPAASGSAVERVLPNGDFYAGSFSGNVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGAWISDRKQGFGQKRYANGDLYEGWWKRNVQDGHGRYVWRNGNEYVGEWKNGVINGKGALVWANGNRYEGQWENGVPKGHGVMKIQHRLLWGENLNGARKRSSVDGRGSVNEKSFPRICIWESEGEAGDITCDIIDNVEASMFYRDGTTSDCEDSRRKSPCCFSTEVKRPGETISKGHKNYDLMLNLQLGIRYSVGKEASTLRELKQTDFDPKEKFWTRFPPEGSKITPPHQSVEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSIFYLTQDDRFMIKTVKKSEVKVLIRMLRSYYQHVSRYENSFVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEEDIDETTTLKDLDLNFVFRVQRNWFQELIKQIELDCEFLEAEKIMDYSLLVGIHFRDDTPCDKMGLSPFLLRTGNRDSYQNEKLMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERVARRSDFDQYTTAGISHLTPYRCGETYDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFVGRIFIEER 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01004 709 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 294 475 IPR027484 -
Cca05g01004 709 SUPERFAMILY SAICAR synthase-like 304 705 - -
Cca05g01004 709 CDD PIPKc_AtPIP5K_like 308 704 - -
Cca05g01004 709 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 393 703 IPR002498 GO:0016307|GO:0046488
Cca05g01004 709 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 144 221 - -
Cca05g01004 709 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 53 157 - -
Cca05g01004 709 SMART PIPK_2 334 706 IPR002498 GO:0016307|GO:0046488
Cca05g01004 709 SMART morn 56 77 IPR003409 -
Cca05g01004 709 SMART morn 79 100 IPR003409 -
Cca05g01004 709 SMART morn 194 215 IPR003409 -
Cca05g01004 709 SMART morn 171 192 IPR003409 -
Cca05g01004 709 SMART morn 125 146 IPR003409 -
Cca05g01004 709 SMART morn 102 123 IPR003409 -
Cca05g01004 709 SMART morn 148 169 IPR003409 -
Cca05g01004 709 PIRSF PIP5K_plant 21 225 IPR017163 GO:0005524|GO:0016308
Cca05g01004 709 PIRSF PIP5K_plant 211 709 IPR017163 GO:0005524|GO:0016308
Cca05g01004 709 Gene3D - 60 110 - -
Cca05g01004 709 Gene3D - 111 155 - -
Cca05g01004 709 Gene3D - 156 219 - -
Cca05g01004 709 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 224 708 - -
Cca05g01004 709 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 22 215 - -
Cca05g01004 709 Pfam MORN repeat 196 211 IPR003409 -
Cca05g01004 709 Pfam MORN repeat 173 195 IPR003409 -
Cca05g01004 709 Pfam MORN repeat 81 102 IPR003409 -
Cca05g01004 709 Pfam MORN repeat 150 171 IPR003409 -
Cca05g01004 709 Pfam MORN repeat 127 148 IPR003409 -
Cca05g01004 709 Pfam MORN repeat 104 126 IPR003409 -
Cca05g01004 709 Pfam MORN repeat 58 80 IPR003409 -
Cca05g01004 709 Gene3D - 476 705 - -
Cca05g01004 709 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 303 705 IPR002498 GO:0016307|GO:0046488
Cca05g01004 709 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 224 708 IPR023610 -
Cca05g01004 709 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 22 215 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01004 Cca-Chr5 26244607 26248169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01004 15 708 Acyl Lipid Metabolism Gene Families AT1G21980 74.895 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01004 K00889 - gmx:100790632 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01004 05 26244607 26248169 Cca05g01004 05 26244607 26248169 ECH