Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00990 ATGAGTATGCTTGCTGCCCAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCTAACTTTGATGGCCCGGAATTTGTAAAGGAAGCAGCAGTTCAAGCCATAAGGGATGGGAAAAATCAGTATGCAAGGGGTCATGGTGTTCCAGACCTGAACTTTGCCATTGCTGATAGATTTAAGAAAGACACTGGCCTTGTAGTGGATCCTGAGAAGGAAATCACTGTCACAACCGGTTGCACAGAAGCAATTGCTGCAACCATGTTAGGACTAATAAACCCTGGTGATGAGGTTATCCTATTTGCCCCTTATTATGATTCTTACTTGGCCACTCTATCTATGGCTGGTGCAAAAGTGAAAGGCATCACTCTTCAACCTCCTGATTTTTCTGTCCCCATTGAAGAATTGAAGTCCACAATGTCCAAACAAACTCGCGCCATTCTCATAAACACGCCTCACAACCCTTCAGGGAAAATGTTTTCAACAGAAGAACTCAATGCAATTGCATCTCTTTGCATTGAGAATGATGTTTTGGTATTTTCTGATGAGGTTTATGACAAATTGGCTTATGATATGGATCATGTTTCTATAGCTTCTCTGCCTGGGATGTTTGGAAGGACAGTTACAATGAACTCATTGGGGAAGACATTTTCACTAACTGGATGGAAGATTGGATGGGCCATAGCCCCTCCACACTTGACATGGGGAGTGAGACAGGCACATGCTTTTCTCACTTTTGCTTCCACTAATCCTATGCAATGGGCAGCTGCAGCAGCTCTAAGAGCACCAGATTCTTACTTTGTGGAATTAAAGAGGGATTACATGGCAAAGAGGGATATTTTAGTGGAAGGATTGAAGGATGTTGGCTTCAGGGTATTCCCTCCAAGTGGAACCTACTTTGTGATTGTGGATCACACACCTTTTGGATTGGAAAATGATGTAGCATTTTGTGAATATCTGATAAAGGAGGTGGGAGTGGCTGCAATTCCAACCAGTGTGTTTTATTTGAATCCTGAGGAGGGAAAGAATCTAGTAAGGTTTACTTTCTGCAAGGATGAGGGAACTCTAAGGGCTGCTGTTGAAAGGATGAAGGAGAAGCTTAAAAGAAAATGA 1107 0.4282 MSMLAAQHGAINLGQGFPNFDGPEFVKEAAVQAIRDGKNQYARGHGVPDLNFAIADRFKKDTGLVVDPEKEITVTTGCTEAIAATMLGLINPGDEVILFAPYYDSYLATLSMAGAKVKGITLQPPDFSVPIEELKSTMSKQTRAILINTPHNPSGKMFSTEELNAIASLCIENDVLVFSDEVYDKLAYDMDHVSIASLPGMFGRTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFASTNPMQWAAAAALRAPDSYFVELKRDYMAKRDILVEGLKDVGFRVFPPSGTYFVIVDHTPFGLENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVERMKEKLKRK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00990 368 CDD AAT_like 11 363 - -
Cca05g00990 368 Gene3D Aspartate Aminotransferase, domain 1 1 361 IPR015422 GO:0003824
Cca05g00990 368 SUPERFAMILY PLP-dependent transferases 2 366 IPR015424 -
Cca05g00990 368 Pfam Aminotransferase class I and II 11 360 IPR004839 GO:0009058|GO:0030170
Cca05g00990 368 Gene3D - 23 261 IPR015421 GO:0003824
Cca05g00990 368 PANTHER FI04487P 1 367 - -
Cca05g00990 368 PANTHER FI04487P 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00990 Cca-Chr5 25946346 25948595 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00990 K23977 - gmx:100814682 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00990 05 25946346 25948595 Cca05g00990 05 25946346 25948595 ECH