Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00986 ATGGGTTTTTCAAAGGAACACCTTCTTGCGCGGTTAAAGGAGCTTCATATTAATTTTTCCCAGTATGAGCATCCAGCTATTTTGACAATTGAAGAAGGGGAAAAGTATGTTGGACATCTGGAAGGTGGACTGAGTAAAAGTTTGTTTTTGAAGGACAAGAAACAGCGGTTTTATCTTGTTTCTGCTTTAAAGAATACCAAAGTAGATATAAAAGTGTTATCTCAGCGGCTAGGTTTAGGAAAAGGTGGTCTAAGAATGGCGCCTTCAGAGGCTCTAGGTGAACTACTTCAGGTGCCCTTGGGTTGTGTCACTCCATTTGCAGTAGTGAATGAATCTGCACGAGATGTTTCACTGTTATTGGATCAAGGATTCAAGACTCAGGAACACTGCTTCTTCCATCCACTATCAAATGACATGACAATTTCTATAAACTCTAATGACCTCGACAAATTTCTTAAGTCAATAGGAAGGGATCCTTCATATGTTGATTTCGAGACCAATCCGCCAGTGGGAAAAGATCATCCACCCGATCTAGCTGCTCTAATTCCATCTGGCTCAATAAATTTGCCTGATCAACCAGAAAAACAACCTTCATACCAAATTCCTGTAGACGGAAACCTTGTTTCTGTGGATAAGGAGTCCAAGATGATTTCAGCAAACGTTGTCAATCCATCCGTATGTGGGAAAAATACAAAGGAAAAACTAGTCAACAAAGCTCATTCATCAGGCAACTTTGCAGATGTTGAGCAATTTGTTGAAGAAATATTGCATAAAACATCAAGATTGTTGCTTTCAGAGATCAAGGAAGACAGAATAAAGCAACATGGAGAGAATCTCGGCGTTCTAGTGTCTGAGAATTTACAAAAAGGTCTTAGCTCAGATTTGGCAAACCTTGCTATGATATTTAAGAACACTGCATACACAGAAGGGTTCCATGCTGGTACTCACTATCAACCCGGACGCTTGTGA 969 0.4004 MGFSKEHLLARLKELHINFSQYEHPAILTIEEGEKYVGHLEGGLSKSLFLKDKKQRFYLVSALKNTKVDIKVLSQRLGLGKGGLRMAPSEALGELLQVPLGCVTPFAVVNESARDVSLLLDQGFKTQEHCFFHPLSNDMTISINSNDLDKFLKSIGRDPSYVDFETNPPVGKDHPPDLAALIPSGSINLPDQPEKQPSYQIPVDGNLVSVDKESKMISANVVNPSVCGKNTKEKLVNKAHSSGNFADVEQFVEEILHKTSRLLLSEIKEDRIKQHGENLGVLVSENLQKGLSSDLANLAMIFKNTAYTEGFHAGTHYQPGRL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00986 322 CDD PrdX_deacylase 5 162 - -
Cca05g00986 322 Gene3D - 2 171 IPR036754 GO:0002161
Cca05g00986 322 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 319 IPR040285 -
Cca05g00986 322 Pfam Aminoacyl-tRNA editing domain 24 151 IPR007214 GO:0002161
Cca05g00986 322 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 319 - -
Cca05g00986 322 SUPERFAMILY YbaK/ProRS associated domain 3 164 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00986 Cca-Chr5 25898043 25903484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00986 - - gmx:100812776 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00986 05 25898043 25903484 Cca05g00986 05 25898043 25903484 ECH