Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00976 ATGGATGCCCAAGGAAGTAAATTCATCTCTCTAACTATGGTGGTAGGCACTTCTGAGCCAGAAAGAAAGGTTCAAGTTCACTCTTTGGGGTTACCACTACCAAATAATGGTGACCTTTTCTCTTATCCAAATCTTCATTGGTTAAACATTTTCCTTGCAACTTACGGTGTGCCTCAAACTTTCATCAACGGTCATGATTGTGACATGATTGCAAAGCTGTCAAAAATGTTACGTGATAGGGTACTTCAGTATCTAGGAGTTCACAAGTGTTTTTGCATGTATGTTATGGTGTTAAAGGATCGATGTTGTTATAACATAGTGAATGTTCCATTCTTCTATCTTGAACAAGTTCCATCGAGTGAGTTTGTGCAAAAAATGGCTTGTGAGGGTGGTCAACATTCTCTGCCTGCAGGAACAACTATGCTTGAAAGGTTTAAGGTTATGGATCATGAAATGGACAGTTGTGTTGTATGTTTGGAAGATTTGAAGTCAGGTGATGATGCAGCGAGGGAGAAGCAATACGACAAGAGAGAATACCTTGATTTTTACACTGACCCTAATGCTACTTCTCCAGCCGTTACTGGAGTGTTGGTATATATAGCTACTTCGGACAAGAAGTCTAACGTAAATTATTTGGGCCCTGCATCTGTTGAAGAGATTGCAAGGCAAATAGTTGAGGCTAAAGGTCCCGCAGGACCAAACAGAGATTATCTTTTCATCCTTGAAAAGGCTCTTCTACAAATTGGATGCAAAGACCAGCATGTCATTGATCTTGCAAATGAAGTCAGGCGTATTCTTGCAGAGGAACACTGA 813 0.4047 MDAQGSKFISLTMVVGTSEPERKVQVHSLGLPLPNNGDLFSYPNLHWLNIFLATYGVPQTFINGHDCDMIAKLSKMLRDRVLQYLGVHKCFCMYVMVLKDRCCYNIVNVPFFYLEQVPSSEFVQKMACEGGQHSLPAGTTMLERFKVMDHEMDSCVVCLEDLKSGDDAAREKQYDKREYLDFYTDPNATSPAVTGVLVYIATSDKKSNVNYLGPASVEEIARQIVEAKGPAGPNRDYLFILEKALLQIGCKDQHVIDLANEVRRILAEEH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00976 270 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 169 267 - -
Cca05g00976 270 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 169 267 IPR006840 GO:0003839|GO:0006751
Cca05g00976 270 Pfam ChaC-like protein 170 264 IPR006840 GO:0003839|GO:0006751
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00976 Cca-Chr5 25697482 25703929 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00976 K22596 - gmx:100305985 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00976 05 25697482 25703929 Cca05g00976 05 25697482 25703929 ECH