Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00974 ATGCGAAGCGTAGAGGTGGCCAAGACGGTGCTCGAGGTCGCCGACGTCGCTTGGACCGCCGTCGAGCACACCCACAATTACCGCCGCCACCACAATTATCCCGTCGTCGCCGACTATAACTGCCCCTCCGACCAAGACTTGGAGTCTTTGCGATCAGAAAATCGACGCCTCAGGAACTTGCTCAGCCAGAATCTGAAACTACTCCAAAACCTCTCTGATTCGCCTTGCTTCGATAATTGCCCTCCCGATTTGAATGACCGGTTAATTGCTACCATGAGGTCTGATGAGTACCTGACTCGGCTGAAGTTCCTACAAGAAGAAACTGCTAGCGGAGGAAATCAATTTCCCTTCAAAGAGGCTAATGAGGTTGATTATCGGTCAGCTGACATTTTGGTCAATGTTGATTCTCAAGAACCCAGTTGGTGGGTTTGGGTTAAGGATGAGACAGATCCTAGTAATATGGAGGAATGGAGTGGAATTGATGATGAGAGTTACTTGGTCATCAGTGAGGAACATGTGGTTGATGGTGTTGCCAACTTTATGGCCAGATGCATTTTGTCAAACCCAAAAGCTCGGAATTTGTCGCCAGAGGAACTGCAGAAAACACTATCAAAAGCATTGCAAGGTACAAGCAAACTGGAAAAGATTTTAGATATTTGGCAAGCTGGAAAGTTGTTTTATACTCTGTCTACCTGGGGACTTGCTTTGGCAGGGCTTTATCAAAGTCGTGCATTGCTGAGAGTTGCTGCAAAGGGTGTTCATACAGGCAGTAAACTTGCCCTGAAGGCTCTCTAA 795 0.473 MRSVEVAKTVLEVADVAWTAVEHTHNYRRHHNYPVVADYNCPSDQDLESLRSENRRLRNLLSQNLKLLQNLSDSPCFDNCPPDLNDRLIATMRSDEYLTRLKFLQEETASGGNQFPFKEANEVDYRSADILVNVDSQEPSWWVWVKDETDPSNMEEWSGIDDESYLVISEEHVVDGVANFMARCILSNPKARNLSPEELQKTLSKALQGTSKLEKILDIWQAGKLFYTLSTWGLALAGLYQSRALLRVAAKGVHTGSKLALKAL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00974 264 PANTHER RING FINGER PROTEIN 3 264 - -
Cca05g00974 264 PANTHER EXPRESSED PROTEIN 3 264 - -
Cca05g00974 264 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00974 Cca-Chr5 25668766 25673562 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00974 - - gmx:100305904 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00974 05 25668766 25673562 Cca05g00974 05 25668766 25673562 ECH