Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00972 ATGCAAAGTTCAGGGTCATTGTTGAAGCAGTTGAGTGTGAAGGAGGCTTGGAAATCAACATCAAATAGGTGGAGTGGGAAGGACAAGTGTAGCAGTGTTGGGGGAGGGGGCTTTGAGGGGTGTGAGGCAAGTCTGAGCCAAATGGAAGGTTTTGCCATGTATGGGAGTGAGGACAATGGAATGATGGGGAAGAAGAGAGTGATGGTGGTGGTGGATCACACTTCACATTCCAAGCATGCAATGAAGTGGGCACTCACCCATGTAGCTAATAAGGGTGATTTGCTCACTTTGCTTCATGTTGTCCCACCTCATAGGGGTTCTGAATCTTCTTGTTCTAACTATCTTGTCAATTATCTTGGTTCTCTTTGCAAAGATTGCAAGCCAGAGGTGGAAGTGGAAGCACTTGTAATTCAAGGACCAAAACTTGCCACAGTGATGAGCCAAGTGAAGAAGCTGGAGGTTTCTGTCTTGGTATTGGGCCAAAAGAAGCCCTCTCCTCTTCTTAGCTGCCTGTGTGGAAGCAACAGTAACAGCAGCTCAGAGGAGTTTGCTGAGCACTGCATCAACAACGCAGAATGCTTGACAATAGGAGTGAGGAAGAGAAGTCAAGGCAACAATGGCTACCTTATCAGCACAAGGTGGCAGAAGAACTTCTGGCTACTGGCTTAG 669 0.4723 MQSSGSLLKQLSVKEAWKSTSNRWSGKDKCSSVGGGGFEGCEASLSQMEGFAMYGSEDNGMMGKKRVMVVVDHTSHSKHAMKWALTHVANKGDLLTLLHVVPPHRGSESSCSNYLVNYLGSLCKDCKPEVEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSPLLSCLCGSNSNSSSEEFAEHCINNAECLTIGVRKRSQGNNGYLISTRWQKNFWLLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00972 222 Pfam Universal stress protein family 65 178 IPR006016 -
Cca05g00972 222 Gene3D HUPs 64 206 IPR014729 -
Cca05g00972 222 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 222 - -
Cca05g00972 222 CDD USP_Like 66 193 - -
Cca05g00972 222 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00972 Cca-Chr5 25636956 25639169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00972 - - gmx:100816511 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00972 05 25636956 25639169 Cca05g00972 05 25636956 25639169 ECH