Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00971 ATGGAAGAAGGCTTTGTTTGCCAGTGGAGCGTCTTTAGATCTCTCTTGGCAATCCTTCAGTGGTGGGCTTTCAATGTCACTGTCATTATCATCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTCCCACTGTCGGTATCCTGTATCCACTTTATATGCTCAACCATTGGAGGATATGTGGTGATTAAGGTGCTGAAGCTTAAACCGCTGATATCTGTTGACCCTGAAGATCGCTGGAGAAGAATATTTCCTATGTCATTTGTGTTCTGTATTAACATTGTGCTGGGGAATGTGAGCCTACGATACATTCCGGTTTCTTTTATGCAGACAATCAAATCATTCACCCCTGCAACAACCGTTGTTTTGCAATGGCTAGTGTGGAGGAAATATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTTACAGAACTTAGCTTTAATGCATTTGGGTTTTGTGCTGCTTTATTTGGCTGTTTGGCTACATCTACGAAGACCATCCTTGCAGAGTCTCTGTTGCATGGGTACAAGTTTGACAGCATAAACACAGTTTATTACATGGCCCCTTTTGCAACCATGATCTTGGCAATACCTGCTTTGCTACTTGAAGGCAATGGAGTTCTTGAGTGGCTAAGTACTCATCCATATCCTTGGTCGGCCCTGATCATTATTTTCAGCTCTGGTGTTTTGGCTTTCTGCCTTAACTTCTCCATTTTTTATGTGATTCATTCGACCACTGCTGTAACGTTTAATGTTGCAGGAAACCTTAAGGTTGCTGTTGCCGTTCTTGTTTCTTGGCTAATTTTTAGGAACCCAATATCATATTTAAATGCTGTTGGATGTGCCGTGACTCTTGTTGGATGTACATTCTATGGTTATGTGAGGCATTTGCTCTCCCAACAGCCACCAGTTCCAGGAACTCCTCGGACACCAAGAACTCCTAGGAGTAAGATTGAGTTGCTTCCTCTTGTAAATGACAAATTAGATGATAAGGTCTAA 1029 0.4198 MEEGFVCQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSTIGGYVVIKVLKLKPLISVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNAFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILAIPALLLEGNGVLEWLSTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAVTLVGCTFYGYVRHLLSQQPPVPGTPRTPRTPRSKIELLPLVNDKLDDKV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00971 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Cca05g00971 342 Gene3D - 66 157 - -
Cca05g00971 342 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Cca05g00971 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 327 - -
Cca05g00971 342 PANTHER SOLUTE CARRIER FAMILY 35 1 327 - -
Cca05g00971 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00971 Cca-Chr5 25632280 25635894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00971 1 342 Organic Solute Cotransporters AT1G77610 89.504 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00971 K15285 - gmx:100817042 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00971 05 25632280 25635894 Cca05g00971 05 25632280 25635894 ECH