Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00959 ATGAATCCCTACATTTTCGGAGCCATACTCCCTCTCCTCGTCACGCTCCTCGTCCGCAACGCCTCCCGGGGGCCCAAACGCCGAGGCCTTCCGGTCGACGTCGCCGGAGACCCCGGCCTCGCCCTCCGCAACCACCGCTTCGAGTCGCCGGTGCGGAGCGCGTGGGAGGGAGTCGCCACGCTCGCCGAGCTCTTCGAGGCGGCCTGCAAGGCGCACGCGGCCAGGCTCCTGCTCGGGACGCGCGCCCTGGTGGCTCGCGAGGTGGACGCCAGGTCCTTCGAGAAGCTTCACCTGGGAGAGTACCGCTGGCTGTCGTACGCCGCAGTCTTCGACGTCGTTTCGGCCTTCGCCTCTGGCTTGGCCTACATCGGCCATCTCAGGGAGGAGCGCGTCGCGATCTTCGCCGACACGCGCCAGGAGTGGTTCATGGCGTTACAGGGTTGTTTCAGGCGAAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATGTTACTCATTGAATGAGACAGAGGTTACAACAGTGATATGTGGGCAAAAAGAATTGAGAACACTTCTAAACATTAGTGGACAACTAGACTCAGTGAAACGTGTGATATGCTTGGATGATGATATCCCATCTAATGCCTCAGCTATTGCATTTGACTGGATAATCACTTCCTTTGCCGAGGTTGAGAGACTTGGTAGAGAAAATCCTGTTGATGCTGATTTACCTCTTTCAGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACAGGATTACCTAAGGGTGTGATGATGACACATGGCAATGTCTTAGCTACACTCTCTGCTGTGATGACAATTGTTCCTGACATTGGGACAAAGGACGTATATCTTGCATACTTACCAATGGCTCATATCTTAGAATTAGCAGCTGAAAATTTGATGGCAGCTGTTGGGGTTCCCATAGGGTATGGTTCTCCTTTGACCCTTACTGATACATCAAACAAGATAAAAAGGGGAACAAAAGGGGATGCCACTGCACTGAGGCCAACTTTAATGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGAGATGGAGTGTTCAAGAAGGTAAATGCAGCAGGAGGATTGCCAAAGAAGTTGTTTCATTTAGCCTATGCACGGAGGCTTCAAGCAATCAATGGCAGTTGGTTTGGAGCTTGGGGCTTGGAAAAGGCTCTTTGGAATTTTCTTGTGTTCAGAAAGGTCCGGGCAATTCTGGGCGGCCGGATCCGTTTTATACTGTGCGGTGGTGCTCCCCTTTCTGGTGATACCCAGAAGTTCATCAATATTTGTCTTGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACCTTCTCTGATGTTGATGATACATCCGTTGGCCGTGTCGGACCACCTCTTCCATGCTCATATATTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAACAAATGACTCACCAATGCCCCGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGGTATTTCAAAAATGAAGAAAAAACAAAAGAATTATACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGATGTTGGGAGATTTCATCCGGATGGATGCCTTGAAATCATTGATCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCATTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGCCCCTTTGTGGACAATATTATGGTCCATGCTGATCCTTTCCATAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTCCACATTGGAAGAATGGGCTTCAGAACAAGGAATTTCTGATGTCAGTTTTTCAGAATTGTGTGAGAAAGAAGAAACTGTGAAGGAGGTACATGCATCACTTGTAAAGGAAGCTCGTTTGGAGAAATTTGAGATTCCTGCGAAAATTAAATTGCTTTCTGACCCATGGACTCCTGAGACTGGTTTAGTCACTGCTGCTCTCAAACTCAAGAGAGAGGCCATAAAAAAGACTTTTGATGGAGAACTTTCGAAGTTGTATGCTTCATAG 2070 0.4797 MNPYIFGAILPLLVTLLVRNASRGPKRRGLPVDVAGDPGLALRNHRFESPVRSAWEGVATLAELFEAACKAHAARLLLGTRALVAREVDARSFEKLHLGEYRWLSYAAVFDVVSAFASGLAYIGHLREERVAIFADTRQEWFMALQGCFRRNVTVVTIYASLGEEALCYSLNETEVTTVICGQKELRTLLNISGQLDSVKRVICLDDDIPSNASAIAFDWIITSFAEVERLGRENPVDADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPDIGTKDVYLAYLPMAHILELAAENLMAAVGVPIGYGSPLTLTDTSNKIKRGTKGDATALRPTLMAAVPAILDRVRDGVFKKVNAAGGLPKKLFHLAYARRLQAINGSWFGAWGLEKALWNFLVFRKVRAILGGRIRFILCGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSYIKLIDWPEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTKELYKVDERGMRWFYTGDVGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPFHSYCVALVVGSQSTLEEWASEQGISDVSFSELCEKEETVKEVHASLVKEARLEKFEIPAKIKLLSDPWTPETGLVTAALKLKREAIKKTFDGELSKLYAS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00959 689 Pfam AMP-binding enzyme 94 559 IPR000873 -
Cca05g00959 689 Gene3D - 51 551 IPR042099 -
Cca05g00959 689 SUPERFAMILY Acetyl-CoA synthetase-like 58 687 - -
Cca05g00959 689 ProSitePatterns Putative AMP-binding domain signature. 250 261 IPR020845 -
Cca05g00959 689 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 13 688 - -
Cca05g00959 689 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00959 Cca-Chr5 25346640 25357785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00959 145 688 Acyl Lipid Metabolism Gene Families AT1G77590 78.245 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00959 K01897 - gmx:100803677 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00959 05 25346640 25357785 Cca05g00959 05 25346640 25357785 ECH