Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00958 ATGTATAGAAATGGTGAGAAAGAAGAAAAAGAAGCATGTTGCTATTTCCATCCAAAGCAAGTGGTTGTTGGTGTGTGCCCCTTGTGCTTGAATGAGAGGCTCCTCGAACTGGCTGCAAAACAAGACCATCATCGCCCCTTTGCCTCCATAGCTTCTCATCACAGGCTTCAAACTTCCTCACACAGGAACCCTATTCACAAGATCTTTGCCTTTGAGTCATTCATCTCAATCAAGTTTGAAGAAAATGGGGTGGCATCGTGGGAAAAGGGCACGGTCTCTAACAAGGGGGGTGTGAATAGTGAAGTCCTAATGACGGAGGTGAAGGATAGTAACAGGAGCGTGATAGAGCACGGCAAGTCAAATAACGCGTTTAGATGGCGAAAGCGTATGGGCCGTTTGGTCCACTTGATCCAATGGAAGAGGTCCAGTAAGGGTGGTGTGGGCCACGTTGGGAACAAGGTTGAGGGAGTGAAGGTTAGAAAGGGTTGGATGAGAACGCTGACAAAGAGGAAGACCGTGGAATAA 525 0.4762 MYRNGEKEEKEACCYFHPKQVVVGVCPLCLNERLLELAAKQDHHRPFASIASHHRLQTSSHRNPIHKIFAFESFISIKFEENGVASWEKGTVSNKGGVNSEVLMTEVKDSNRSVIEHGKSNNAFRWRKRMGRLVHLIQWKRSSKGGVGHVGNKVEGVKVRKGWMRTLTKRKTVE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00958 174 Pfam Protein of unknown function (DUF740) 8 70 IPR008004 -
Cca05g00958 174 PANTHER OS04G0690500 PROTEIN 72 173 - -
Cca05g00958 174 PANTHER OS04G0690500 PROTEIN 4 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00958 Cca-Chr5 25335196 25336801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00958 - - gmx:100807400 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00958 05 25335196 25336801 Cca05g00958 05 25335196 25336801 ECH