Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00957 ATGGAGTTTCCTATGATAACCAAGTTTCACATCCCAGTTGTGTCTTCTCTTGTGCTTTTAGTTTTATCTGTTGCAACTACCGTAACTGCCGCAGAACATTGTGATTTTCCTGCAATCTTTAACCTCGGAGCCTCAAACTCAGACACTGGTGGCTTGGCTGCTTCCCTTTTGGCAGTGCCGCCACCATATGGAGAGACCTATTTTCATACACCTGTTGGAAGGTTCTCTGATGGCCGAATCATTCTTGATTTCATTGCACAGAGTTTTGGACTCCCTTATATCAGTCCATATCTTGATTCACTAGGGACCAACTTCTCAACTGGAGCAAACTTTGCAACAGCAGGATCCACAATCAAACCCCTACAAGGTCAATCTCAGCTTAAATTCAGCCCTTTCAACCTAGGAATTCAGTTCACACAATTCAAACGTTTTAAAACCAAAACACAGTTGATTAGAAAGCAAGGTGGGGTATTTGCGACATTGATGCCCAAAGAAGAGTACTTTGCTAGAGCATTATACACATTTGATATTGGTCAAAATGACCTCACAGCTGGCTTTTTTAGTAACATGACCCTACAGCAACTCAATGCATCTGTACCTGATATTGTCTCAACTTTCGCATCAAATATCAAGAACATCTACAACTTGGGTGCAAGATCACTTTGGATACACAACACAGGACCCCTTGGCTGCCTCCCTCAAATTATGACCAATTTTCTATCCGCTGAAAGAGATGCTTATGGTTGTGCAAAGCCATATAATGATGTGTGTCAGTATTTTAACCAGAATTTGAAGGAAGCCTTAGCTCAACTTCGTAAGGAGCTTCCTTTGGCTGCAATCACATATGTAGATATCTTCTCTGCTAAGTACTCTCTTTTCAGCAACCCAAAGAAATATGGATTTGAGCAACCACTTGTTAGTTGTTGTGGTTATGGAGGGAAGTACAACTTCAGCAATAGTGTTGGATGTGGAGGAACCATAAAGGTGAATGGCACTGATATTTTCGTGGGTTCATGTCCAAAACCATCTGTTAGAGTGATATGGGATGGGACCCACTTCACTGAAGCAGCCAACAAGGTTGTCTTTGATCTAATCTCTACTGGGGCTTTCAATATTCCACGCTTTCCCTTGAAAATGGCATGTCAAAGAAGCATCAAATTTTTCTAA 1167 0.4147 MEFPMITKFHIPVVSSLVLLVLSVATTVTAAEHCDFPAIFNLGASNSDTGGLAASLLAVPPPYGETYFHTPVGRFSDGRIILDFIAQSFGLPYISPYLDSLGTNFSTGANFATAGSTIKPLQGQSQLKFSPFNLGIQFTQFKRFKTKTQLIRKQGGVFATLMPKEEYFARALYTFDIGQNDLTAGFFSNMTLQQLNASVPDIVSTFASNIKNIYNLGARSLWIHNTGPLGCLPQIMTNFLSAERDAYGCAKPYNDVCQYFNQNLKEALAQLRKELPLAAITYVDIFSAKYSLFSNPKKYGFEQPLVSCCGYGGKYNFSNSVGCGGTIKVNGTDIFVGSCPKPSVRVIWDGTHFTEAANKVVFDLISTGAFNIPRFPLKMACQRSIKFF 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00957 388 Pfam GDSL-like Lipase/Acylhydrolase 39 365 IPR001087 GO:0016788
Cca05g00957 388 CDD SGNH_plant_lipase_like 37 368 IPR035669 -
Cca05g00957 388 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 385 - -
Cca05g00957 388 Gene3D SGNH hydrolase 25 368 IPR036514 -
Cca05g00957 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 9 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00957 Cca-Chr5 25319395 25322111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00957 37 368 Acyl Lipid Metabolism Gene Families AT4G10950 28.571 3.50e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00957 - - gmx:100818460 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00957 05 25319395 25322111 Cca05g00957 05 25319395 25322111 ECH