Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00955 ATGGATTTTCGTAGCCCTGTTAAGTTTCATACCCCTCAAGTGTCTCTTTTTGTGATTTTATCTATTGCTACAATTGTACCAAACATTGTATTTGCAACCAAAGAATGTGTTTTCCCGGCCATCTTCAACTTTGGTGACTCAAACTCAGACACTGGTGGCTTGGCAGCTTCACTTATTGCACCAACACCACCTTATGGAGAAACCTATTTCCACAGACCTGTTGGAAGATTCTCTGATGGACGTCTTATCATTGATTTCATAGCCAATAGTTTTGGACTGCCTTATCTAAGTGCATATCTTGATTCCCTGGGGACCAACTTTTCACGTGGTGCAAACTTTGCAACAGCTGCATCAACTATAAGACTCCCACCTAGTGTTATACCTCTTGGTGGATTCAGTCCCTTCTACCTTGGTATTCAGTATACTCAATTCAAAGACCTCATACCCATAACACAATTTATTAGACATGAAGGAGGAGTGTTTGCAAGCTTGATGCCAAAAGAAGAGTATTTTCATAAAGCTTTGTACACATTTGATATCGGTCAAAATGATCTTGGTGCTGGCTTTTTTGAAAACATGACTATACAACAAGTCAATGCTTCTGTACCTGATATAGTCAATGCCTTCACAAAAAATGTTAAGGACATATATGATCTGGGAGCAAGATCATTTTGGATACACAACACAGGACCCATTGGCTGCCTCTCATACATTTTGGCCAATTTTCTATCAGCTGAAAGGGATGATTATGGTTGTGCAAAGCCATATAACGAAGTAGCCAAATATTTCAACCAAAAGTTAAAGGAAGCTGTGGTTCAACTTCGGAAAGACCTTCCTCAAGCTGCAATCACATATGTAGATATCTACTCTGTTAAGTACTCTCTTTTCAGCAATCCAAAGAAATACGGATTTGAGCTACCACTTGTTGCTTGTTGTGGCTATGGAGGGGAATATAACTATAGCAGTAGTGTTGGATGTGGAGGAACCATAGATGTCAATGGCACTAAAATTTTTGTGAGTTCATGTGAAAGGCCATCAGTTAGAGTGAATTGGGATGGGATCCATTACACTGAGGCTGCTAACAAGTTCATCTTTGATCAAATTTCTACTGGGGCTTTCTCAGAGCCACCCCTTCCTTTGAGTATGGCATGTCACAAAAATTAG 1164 0.3986 MDFRSPVKFHTPQVSLFVILSIATIVPNIVFATKECVFPAIFNFGDSNSDTGGLAASLIAPTPPYGETYFHRPVGRFSDGRLIIDFIANSFGLPYLSAYLDSLGTNFSRGANFATAASTIRLPPSVIPLGGFSPFYLGIQYTQFKDLIPITQFIRHEGGVFASLMPKEEYFHKALYTFDIGQNDLGAGFFENMTIQQVNASVPDIVNAFTKNVKDIYDLGARSFWIHNTGPIGCLSYILANFLSAERDDYGCAKPYNEVAKYFNQKLKEAVVQLRKDLPQAAITYVDIYSVKYSLFSNPKKYGFELPLVACCGYGGEYNYSSSVGCGGTIDVNGTKIFVSSCERPSVRVNWDGIHYTEAANKFIFDQISTGAFSEPPLPLSMACHKN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00955 387 CDD SGNH_plant_lipase_like 39 371 IPR035669 -
Cca05g00955 387 PANTHER ESTERASE-LIKE ISOFORM X1 12 387 - -
Cca05g00955 387 Pfam GDSL-like Lipase/Acylhydrolase 41 368 IPR001087 GO:0016788
Cca05g00955 387 Gene3D SGNH hydrolase 30 371 IPR036514 -
Cca05g00955 387 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00955 Cca-Chr5 25286549 25288349 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00955 24 371 Acyl Lipid Metabolism Gene Families AT4G10950 28.691 4.64e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00955 - - gmx:100779094 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00955 05 25286549 25288349 Cca05g00955 05 25286549 25288349 ECH