Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00946 ATGGCGACgaggagcaaagcagaagcagaagcagagggagaaggagaaggagaaggagaaggTGGTGGCAATAAGATCGTATGGAAGGAAGCGGAGCAGAGATTCGAGACGGAGGACAAGGAGGCGTTCGTGCAGTACGTGTTGAGAGAGAAGGGAAAGGTGATGGATTTGGTCCACACCTTCGTTCCCCCTTCCAAGAGAGGTCTCGGCTTGGCTTCCCTCCTCTGCGTCGCCGCCTTTCACCACGCCCAATCCCGCTCCTTATCCATCGTCCCCTCCTGCTCCTATGTCTCTGACACATTTCTTCCCCGGAACCCATCTTGGAATTCTGTTGTGTACACAGAGGGCGGCAAATCTAATATCTGA 366 0.4617 MATRSKAEAEAEGEGEGEGEGGGNKIVWKEAEQRFETEDKEAFVQYVLREKGKVMDLVHTFVPPSKRGLGLASLLCVAAFHHAQSRSLSIVPSCSYVSDTFLPRNPSWNSVVYTEGGKSNI 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00946 121 Gene3D - 22 121 - -
Cca05g00946 121 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 24 119 - -
Cca05g00946 121 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 25 113 IPR016181 -
Cca05g00946 121 PANTHER PROTEIN NATD1 24 119 IPR045057 -
Cca05g00946 121 Pfam GCN5-related N-acetyl-transferase 35 110 IPR031165 -
Cca05g00946 121 MobiDBLite consensus disorder prediction 1 29 - -
Cca05g00946 121 ProSiteProfiles Yjdj-type Gcn5-related N-acetyltransferase (GNAT) domain profile. 27 113 IPR031165 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00946 K06975 - gmx:100778176 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00946 05 25206285 25206896 Cca05g00946 05 25206285 25206896 ECH