Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00930 ATGGCCACATTCAGCAACATTTCTATGATAGTTCTATGTTTCGTGATTAGTTCTGCATTAATGATCCAAACCGGGGTTTCACGTGATATTCCAGAAGCAGAAGCATCAAATGCACCAGAACCATCATCATCGTATGATGATGATCATCTAAGCACCTGTGCAGCCAAGTTAGACCCAGGTTGTGGTGACGAGATATTCTCAGCTGTATTTTATGGTAGCCAAACAATTAGTGGTGAATGTTGTGACACACTTGTGAGTGATGCTGGAAAAGCATGCCATGATGATATGACAAAATATATTTTGAAATTAAAAAAGTTCCCGAATGAACATCAGATCTTGCATAGAAGTGAGAATGTTTGGAATGCTTGTGTTGCGTTGGACTACCCTGCGGCTGAACCAGTTGCTGTGCCCAGTGATGAGAGTTTATACAATTGA 435 0.4069 MATFSNISMIVLCFVISSALMIQTGVSRDIPEAEASNAPEPSSSYDDDHLSTCAAKLDPGCGDEIFSAVFYGSQTISGECCDTLVSDAGKACHDDMTKYILKLKKFPNEHQILHRSENVWNACVALDYPAAEPVAVPSDESLYN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00930 144 PANTHER ECA1 GAMETOGENESIS RELATED FAMILY 1 131 - -
Cca05g00930 144 Pfam Prolamin-like 52 124 IPR008502 -
Cca05g00930 144 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00930 Cca-Chr5 24938041 24938519 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00930 - K24610 gmx:102670035 155.221