Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00929 ATGGTTAGTTATGCATTGATGGTGCAAACCGGATTTTCACGTGAAATTCCAGAACCATCAAATGCACCAGAACCATCAAAGGAATATTTAATCAATTGTGCAGAATCGTTAGATCAAATTTGTGGTGACGAGATATTCTCAGCTATATTTTTTGGTAACAAAACAGTTAGTAGTGATTGTTGTGACACACTTGTGAGTGATGTAGGGAAAGAATGCAATGATGATATGATAAATTTTATTTTGAAATCTGAAATGTTACCCAACATCAATGAGTCTCAGGTCTTGAAGAGAAGTGAGAAGGTTTGGAATGAATGTGTTTTGCAGGGCTACCCTGACCTTGAACCTACAATTCATGACCAGAATGATGAGAATTTATACAATTGA 384 0.3568 MVSYALMVQTGFSREIPEPSNAPEPSKEYLINCAESLDQICGDEIFSAIFFGNKTVSSDCCDTLVSDVGKECNDDMINFILKSEMLPNINESQVLKRSEKVWNECVLQGYPDLEPTIHDQNDENLYN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00929 127 Pfam Prolamin-like 32 106 IPR008502 -
Cca05g00929 127 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 1 111 - -
Cca05g00929 127 PANTHER ECA1 GAMETOGENESIS RELATED FAMILY 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00929 Cca-Chr5 24932965 24933348 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00929 - K04511 gmx:102670035 129.798