Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00910 ATGGGGAGTAAACAGGTCCCGATTGACCTAGATGATTATGATGTGGGTCAGAATTTGAAAGGTCCTGGTTCTGAAGATTATAGGTTAGAAAGACGATGGAAGAGAAGGGAACTTTCAAATAAACGTTTAAAGCCTTATGATTTTGATAGTGATACAAGGTCAAGTGTGAAGAGTAAACGTTTAAAGCCTTGTAATTTTGATAGTGCTACCAGGTCAAGTGTGAAGAGTTGTGGAAACGTGATATCTTTAACTAAGAAAAATGTTCATATGCCAGAAGATGAAATGGATGAAGATTACAAAGCGTTTTTGGTTAATTATAAACCTGATATTGATGTTGTGAGTGATGATAGTAATATTGATGGTTCTAATAATGACATCAATATTGGCCGCAACAGTGATCATGATGATCATTCTGATAGTGACTATAGAACATTCTTGGATAATTACACTGAGAATGTGAAGGGTTTGAATCAAAGGGATGAGACTGGAAATCAAGGGAGTGATTTGGTAAGAAGACAGACAAGTGCCCCAATGAAATCTCAGCAGAATTTGGAGGGTAAAAGAGGATCAAGTAAGAAAAAGCCTCGTGAAGATATTTCTGGCGTCCCCAGGAGCAATGACAATTGTTATTCAGAGTTAGATGATGTGGATGAAGATTACCAGACATACCTGAATTCTTGTTGCAGAGAAGATGACGAAATGCCTACTGAATTAATACAAAAGAGGTCAAGTGTTGTGCAAAATTCACAAGTTTCTGATCATGCATATGTTACTCCTGAAATGCTGAGTGATGTTGATGAAGATTATCAACAATATCTGAATTCTATTAGGATTGTTGATGGCGAGGTGGAATGTACGCCAGAGAGGAATGATGATGATGACAGCAATTCCTCTAACTCAGATCTTATTGTTCTAGAGGCTAATCAAATTCATGAAAATACTCCATTTGTTTCATCTAAAGCATACGATCCATCTTGGTTCCAAACAGAGAAGAATCCCAGAGATAACTGGCAATTATCTGGCAAAGCTCATTCTCAGTTTAGGAGAAGACTTATGAATGATCTTCAAAGGCCTTATGACCAAGAAGAATGTAATAGGCTTCTTCATGAAGTACGCCAGAAAAGGCAAAAGGAACGTCATATAGAAACTCGTCGAGGGGTGGTTAAGTCTTACCACACTAAGGGTGTCAACAAATCATATCTTGAGATGTACCCTGCAGATCTCGCAAAAGCACTTGTCCAATTCAAACAACCAGAAAGGGTTTTGTTTCTCTTGCGTGGATTTATTTTCTGGTTGCAAAACTTGACCCACGAAGGAATATTTCAGCCTTGGCTTGATCAATTGTGTTTGGAGAGGTTACGAAAAATTTAA 1371 0.3778 MGSKQVPIDLDDYDVGQNLKGPGSEDYRLERRWKRRELSNKRLKPYDFDSDTRSSVKSKRLKPCNFDSATRSSVKSCGNVISLTKKNVHMPEDEMDEDYKAFLVNYKPDIDVVSDDSNIDGSNNDINIGRNSDHDDHSDSDYRTFLDNYTENVKGLNQRDETGNQGSDLVRRQTSAPMKSQQNLEGKRGSSKKKPREDISGVPRSNDNCYSELDDVDEDYQTYLNSCCREDDEMPTELIQKRSSVVQNSQVSDHAYVTPEMLSDVDEDYQQYLNSIRIVDGEVECTPERNDDDDSNSSNSDLIVLEANQIHENTPFVSSKAYDPSWFQTEKNPRDNWQLSGKAHSQFRRRLMNDLQRPYDQEECNRLLHEVRQKRQKERHIETRRGVVKSYHTKGVNKSYLEMYPADLAKALVQFKQPERVLFLLRGFIFWLQNLTHEGIFQPWLDQLCLERLRKI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00910 456 MobiDBLite consensus disorder prediction 113 212 - -
Cca05g00910 456 MobiDBLite consensus disorder prediction 1 25 - -
Cca05g00910 456 MobiDBLite consensus disorder prediction 145 185 - -
Cca05g00910 456 MobiDBLite consensus disorder prediction 186 201 - -
Cca05g00910 456 PANTHER F14J8.16 PROTEIN 19 454 - -
Cca05g00910 456 MobiDBLite consensus disorder prediction 129 144 - -
Cca05g00910 456 PANTHER F14J8.16 PROTEIN 19 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00910 Cca-Chr5 24499059 24502629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00910 - - gmx:102659598 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00910 05 24499059 24502629 Cca05g00910 05 24499059 24502629 ECH