Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00904 atgaaagtgaGTTGgaagaagaacgacaacaagaagaagaaACGTTGTTTACCAACGTTGTCACACTTCACGGACCTTCCTTTCGAGCATGACGATCAACCCCATCCACACGAAGCTGAAGACGGCGCACGTGTTCCCGATACTCACCAATTGGCTAATGAATTTCGAGCTCAAGGAGACAAGCTTGCCATGGATGGCAAGTACCGTGAAGCACTAGGTAAATGGGAAGCTGCTCTTGCATTGACACCTGATGTTCCAGTTTTGCATGAACAAAAGGCCCAGGTTCTACTAGAAATTGGAGATGCTTGGAATGCTGTAAAAGCTGCAACTCGAGCTACTGAATTGGAACCATCATGGGCTGAGGCATGGGTCACACTTGGCAGAGCACAATTGAATTTTGGTGAGCCAGATAATGCTATTGAAAGTTTTGACCGTGCTTTAGCTCTCAAGCCTGATTATGAGGAAGCTCAAGATGATAGGAAAACTGCATCACATCTTGTAAAGAAGAGAAAACAACTTCACTCATCAGGCCTGAGTGCTACTCAAAATCGATATGTGGTGGGTGAAAAGGATGAAAGCTCAAGGGCTGAAGTTGTCTAA 600 0.4283 MKVSWKKNDNKKKKRCLPTLSHFTDLPFEHDDQPHPHEAEDGARVPDTHQLANEFRAQGDKLAMDGKYREALGKWEAALALTPDVPVLHEQKAQVLLEIGDAWNAVKAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYEEAQDDRKTASHLVKKRKQLHSSGLSATQNRYVVGEKDESSRAEVV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00904 199 ProSiteProfiles TPR repeat region circular profile. 120 152 - -
Cca05g00904 199 Pfam Tetratricopeptide repeat 92 153 - -
Cca05g00904 199 SUPERFAMILY TPR-like 50 170 IPR011990 GO:0005515
Cca05g00904 199 MobiDBLite consensus disorder prediction 24 45 - -
Cca05g00904 199 SMART tpr_5 52 85 IPR019734 GO:0005515
Cca05g00904 199 SMART tpr_5 86 119 IPR019734 GO:0005515
Cca05g00904 199 SMART tpr_5 120 153 IPR019734 GO:0005515
Cca05g00904 199 Gene3D Tetratricopeptide repeat domain 45 193 IPR011990 GO:0005515
Cca05g00904 199 PANTHER OSMOSIS RESPONSIVE FACTOR 1 193 - -
Cca05g00904 199 MobiDBLite consensus disorder prediction 154 199 - -
Cca05g00904 199 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00904 59 163 EF-hand Containing Proteins AT2G32450 30.476 9.63e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00904 - - gmx:100305761 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00904 05 24337311 24341446 Cca05g00904 05 24337311 24341446 ECH