Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00892 ATGGaacacaccaatttcaacaacaacaacaacatcagcagcagcagcagcagcagTGGCTATAGTTACAATGATGTTCATTTTTGTGAAGAGACCATAGTAAATGTTCCTTTCTCATGGGAACACAAGCCTGGTCTCTCTAAAGTCACCAATGGCCACAATGGTGCTAGCTTGGTGCTTCAGCCTCCTCCATGTTCATCATCTGGATCTGGAACTGACACTCACAGACACAAAGTGGAGGAGGAGTCACAGATTCTATGTGCAGTGCAGAACTCACTCAGAATCAGCTCTTTCCGGATTGAGACTCACAAGGAAGAAGACCCTTTTGTTGAAGCTTACAAGAAATGCACTCAAAGTCCCTTTATACATCAACAGAGTCGTAGGGTCCAAAAGAGCAATAGATCTTGGCCTACCATAAGGAAGTATATTCATATTCTCTCTTGCAAGCACTCCAATGATGTTTTGTAG 468 0.3825 MEHTNFNNNNNISSSSSSSGYSYNDVHFCEETIVNVPFSWEHKPGLSKVTNGHNGASLVLQPPPCSSSGSGTDTHRHKVEEESQILCAVQNSLRISSFRIETHKEEDPFVEAYKKCTQSPFIHQQSRRVQKSNRSWPTIRKYIHILSCKHSNDVL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00892 155 PANTHER BNAA08G25910D PROTEIN 29 151 - -
Cca05g00892 155 PANTHER T22J18.15-RELATED 29 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00892 Cca-Chr5 24087848 24088809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00892 - - pvu:PHAVU_001G030900g 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00892 05 24087848 24088809 Cca03g01774 03 36915578 36916030 PCT