Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00858 ATGGATAAAGAGTCGCATATCCATAACAACCATGGCAATAGCAACAACAACATTGCTAGCGTTAGAGAAAGAGACAAAAGCGGAGGAGGGGATGGTGGACCCGGGTCGTTGTTGCTGAGGGGTGGCACCGATGGTATGAGGCACTCAACGACGTCGGATTTGGTGCTTCAGTGGGGTAACCGGAAGCGACTTAGGTGCATGAAGGTGCAGGTCAAACACGACTCTTCTTCCAACCCGGTTCAGAGAACAACGGTTCGGGTGGATCGGCGGGTGGTTAGAACCGAGAAAGATTCTTCAAATAGACCCTTACCCTTACCCTCTGTCGCTAATAACAACAATAATAGTAGTCACCAAAATAATAGTTTTAATCAGAGTAACGGGTATCTGAATCTCCGTCAACGGCCCCCTTCCCCGCAGCAACTTCCTCCGCGTATTCTCAGGAATTCGGAGAATTCAAGTGCTATGAGAGGAGGCCAAAGCAACGGGAGTGTTAGGGGAATTGCATCACCGGACAGGGGTGCGCACGATAAGAGAGGGACCCATAACAACCACCTTAATGACAATAATAACAAGTCTGTGGTCTCATCAGACACCGCGCACGATAGCAAGAAGGGTGGTGGTGGGTCGCCGTCCGGCAGTGGGGATGCTGCTCCGCCGATGTGGCTGCCAAAGTTCGTGATTGCCTTGACCAACAAGGAGAAGGAAGAAGATTTTCTGCTCTTGAAGGGTTCTAAGCTTCCCCAGAGACCCAAGAAGAGAGTCAAATTCGTACAGCGCACCCTCAATCTCGTGAGTCCTGGTACATGGCTGTGCGATCTTACTCTTGATCGATATGAAGTTAGGGAGAAGAAGATAACCAAAAAGAGACCAAGAGGGTTGAAAGCAATGAGCAACATGGACTCCGACTCTGAATAG 915 0.4984 MDKESHIHNNHGNSNNNIASVRERDKSGGGDGGPGSLLLRGGTDGMRHSTTSDLVLQWGNRKRLRCMKVQVKHDSSSNPVQRTTVRVDRRVVRTEKDSSNRPLPLPSVANNNNNSSHQNNSFNQSNGYLNLRQRPPSPQQLPPRILRNSENSSAMRGGQSNGSVRGIASPDRGAHDKRGTHNNHLNDNNNKSVVSSDTAHDSKKGGGGSPSGSGDAAPPMWLPKFVIALTNKEKEEDFLLLKGSKLPQRPKKRVKFVQRTLNLVSPGTWLCDLTLDRYEVREKKITKKRPRGLKAMSNMDSDSE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00858 304 MobiDBLite consensus disorder prediction 143 166 - -
Cca05g00858 304 MobiDBLite consensus disorder prediction 100 135 - -
Cca05g00858 304 MobiDBLite consensus disorder prediction 1 48 - -
Cca05g00858 304 Pfam Protein of unknown function (DUF1639) 229 278 IPR012438 -
Cca05g00858 304 PANTHER PUTATIVE (DUF1639)-RELATED 1 304 - -
Cca05g00858 304 MobiDBLite consensus disorder prediction 170 184 - -
Cca05g00858 304 MobiDBLite consensus disorder prediction 69 219 - -
Cca05g00858 304 PANTHER INTEGRATOR COMPLEX SUBUNIT 6 HOMOLOG 1 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00858 Cca-Chr5 23383489 23393535 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00858 - - gmx:100812595 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00858 05 23383489 23393535 Cca05g00858 05 23383489 23393535 ECH