Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00840 ATGGAGTTGAAGGAAAGTAATGACATCGAGCATTCATCTTTCACGCCACAAATACAGCATGACCTTTGGCCTCTAGATCCAGTTGATCCAAATACGGCAAAGTTTCCATGTTGTTTGGTTTGGAATCCACTTCCCGTGGTCTCATGGTTGGCTCCCTTCATCGGTCATGTTGGCATTTGTAGGGAAGATGGAGTTGTTTTGGATTTTTCAGGATCATATACTGTGAATGTTGATGATTTTGCATTTGGTTCAGTGGCAAAATACGTGCAACTTGATCGTAAACAGTGTTGTTTACCTCCTAACCCATCTGCACATACATGCAAGCAAGGTTACCGCCATTCTGAGTATGGTACTGCAATCACATGGGATGACGCAATACAGTCAAGTGTGCGTGAATATGAGAGCAAAACCCACAACACTTTCACTTGCAACTGTCACTCATTTGTTGCTAATTGTCTGAATCGGATGAGTTATGGTGGATCAATGAAGTGGAACATGGTTAATGTAGGAGCTATGTTACTATTCAAGGGGCATTGGGTTGGCATCAGGGCAATTATAAGGGCTTTTCTGCCTTTTGTTGTGGTTTCTTGCTTTGGTGTATTCGCTGTTGGGTGGCCCTTCTTACTTGGGCTATTATCTTTTTCTCTACTCTTACTGTTGTGGTTTCTATTGGGAACTTACTTTTTAAAAAACATGCTTGAGTGCTAG 708 0.4195 MELKESNDIEHSSFTPQIQHDLWPLDPVDPNTAKFPCCLVWNPLPVVSWLAPFIGHVGICREDGVVLDFSGSYTVNVDDFAFGSVAKYVQLDRKQCCLPPNPSAHTCKQGYRHSEYGTAITWDDAIQSSVREYESKTHNTFTCNCHSFVANCLNRMSYGGSMKWNMVNVGAMLLFKGHWVGIRAIIRAFLPFVVVSCFGVFAVGWPFLLGLLSFSLLLLLWFLLGTYFLKNMLEC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00840 235 Pfam Protein of unknown function (DUF778) 44 93 IPR008496 -
Cca05g00840 235 Pfam Protein of unknown function (DUF778) 95 179 IPR008496 -
Cca05g00840 235 PANTHER UNCHARACTERIZED 1 235 IPR008496 -
Cca05g00840 235 PANTHER PROTEIN REVERSION-TO-ETHYLENE SENSITIVITY1 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00840 Cca-Chr5 23045564 23049584 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00840 K20726 - gmx:100817575 389.423