Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00829 ATGGCCGATTGTGGTGCCCAAACTAGAGTTACGATACGAAACACCCATGGAGAAAATCTCGTGGGGATCTTACATAATGGGGCTTCCACTTCGCTTGTTATCGTGTGCCATGGCTTCCAATCTTCCAAGGAAAGGATTCCCATGGTGAACGTTGCTGCTGCTCTGGAAAAGGATGGAATGAGTGCCTTCCGATTTGACTTTGCGGGAAATGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTACTACAGAGAAGTTGAAGACCTGCGAGCTGTAGTTCAACACTTCCGTGAGCAGAAATACATAATTACAGCAATTGTTGGTCATAGTAAAGGGGGTAATGTGGTGCTCTTATATGCCTCAAAATATAAGGATATTCATATTGTTGTCAATATATCTGGTCGATTCAATCTAGCAAGAGGCATGGAAAGTCGTTTGGGCGAAAATTTTATACAGAGGATCAAACAAGATGGATATATAGATGTTAAAAATAAAAGAGGGAAGATCGTGTATCGTGTTACCGAAGAAAGTTTGATGGACCGCCTATCTACCATAACCCATCTTGCCTGCCTATTGATTCCCCAAGATTGCAGAGTGTTGACAATTCATGGATCCATGGATGAAACTGTCCCTGCAGAAGATGCTTCAGAGTTTGCTAAATTTCTATCTAATCATGAACTGTGCATCATAGAAGGAGCTGATCATGAATATTCTTCTCATCAAGATGTGTTGACCAGCTTGGTTTTGGAATTCATCAAAATTCATACTGATAAAGACAAAGATACATCTAAACAGACACGATTTGGAAGAGTACATAAACCTATTCATTCTCGATTCTAG 840 0.4048 MADCGAQTRVTIRNTHGENLVGILHNGASTSLVIVCHGFQSSKERIPMVNVAAALEKDGMSAFRFDFAGNGESEGSFQYGNYYREVEDLRAVVQHFREQKYIITAIVGHSKGGNVVLLYASKYKDIHIVVNISGRFNLARGMESRLGENFIQRIKQDGYIDVKNKRGKIVYRVTEESLMDRLSTITHLACLLIPQDCRVLTIHGSMDETVPAEDASEFAKFLSNHELCIIEGADHEYSSHQDVLTSLVLEFIKIHTDKDKDTSKQTRFGRVHKPIHSRF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00829 279 Pfam Serine aminopeptidase, S33 31 142 IPR022742 -
Cca05g00829 279 SUPERFAMILY alpha/beta-Hydrolases 8 253 IPR029058 -
Cca05g00829 279 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 261 - -
Cca05g00829 279 Gene3D alpha/beta hydrolase 4 276 IPR029058 -
Cca05g00829 279 PANTHER RE40534P-RELATED 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00829 Cca-Chr5 22808084 22812195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00829 12 125 Acyl Lipid Metabolism Gene Families AT2G39410 32.231 1.72e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00829 K06889 - gmx:100776424 501.516