Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00820 ATGTACTGTGCATATATACAAGTCCTTGATCGACCTTATAGGCCATCTCGCTCTTGTGGAACTTCCCCTTCTCCCCTTCATGCTTGCATCATGAAGATCTTTGCAGAGCTACAATTATTGTTGATTTTTGCTTTTCTTTTGCACAGTGGAAATGGAATTGAAACATTCAAATTCAGGGTACCTGAAAAACAACTTTACCGAACTTCTTATCACTTTCAGCTCCAACAAAATTGGATGAACGATCCAAATGGACCTATGTACTACAAAGGTGTCTACCACCTTTTCTACCAACATAATCCTGAAGCAGCAACCTTTGGTGACAGGATTGTATGGGGTCACTCAGTATCCTATGATCTCATCAATTGGATTCATCTGAATAATCCAATTGAACCGAGTGAGCCCTATGACATTAATAGTTGTTGGTCTGGCTCAGCCACTATACTCCCAGGGAAAGAACAACCTGTTATTTTATACACAGGAATTGATGATAAAAAACACCAAGTTCAGAACTTAGCTATGCCAAGGAATCTATCAGACCCCTTCTTAAGAGAATGGGTGAAACACTCTCAGAACCCTGTCATGACTCCTCCTAGTGGAGTTGAAGTGGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAGAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGTTGATGAAGGGAAGACAATTCTCTACCAAAGTGAGGATTTTGTTCATTGGACAGTTGATCCTAATCCCTTTTATGCATCAGATAATACAGGAGTTTGTGAGTGTCCAGACTTCTTTCCCGTGTTCATAAATGGCAGCACAAATGGGGTGGACACATCTGTGCAAAATTCAAGTGTTAGACATGTCTTGAAGATAAGCTATCTAAGAAAACAGCATGATTACTATTTTCTTGGCAAATATGTTTCTGATCAGGAAAACTTTATTCCTGATGTTAGGTTTACAGGAACTAGTTCAGACTTGAGGTATGACTATGGTAAATTCTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAGCAAGAGGATATTGTGGGGATGGGTGAATGAATCTGACACCACACAAGATGACATTGAGAAAGGATGGGCCGGTCTACAGTCAATTCCAAGACAAGTTTGGCTTGATAAAAGTGGGAAGCGATTGGTGCAATGGCCAATTGAAGAGGTAGAAAAACTACGTGACAAGCAAATCAGCATTACAGGAGAGAAACTTGTACATGGATCAAATCTTGAAGTCTCAGGTGTCACCGCATCACAGGCTGACGTAGAAGTGATGTTTGAGCTATCTGAACTAGAAAATGCCGAGTTTCTTGATCCCAATGGAGTTGATCCCCAACAACTCTGTAGCCAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAGAGGATCTCAAAGAGCACACTGCAATCTTCTTCAAAATATATAGAGCACCCAATAGATATGTATCCCTCATGTGCAGTGATCAAAGCAGGTCCTCATTGAGGCTTGACCTTGACAAGACTACATATGGAACCATCTTTGACATAGATCCTAATCTCAAAGAAATTTCACTAAGAAGCTTGATTGATCACTCTATTATTGAGAGTTTTGGCGATGAAGGGAGAGTTTGTATCACAAGTAGAGTTTATCCATCATTGGCTATAGACAAAGATGCCCATCTTTATGTATTTAACTATGGAAGCCAGAGTGTGGTGATCTCAAATCTGAACGCTTGGAGCATGAAGCAAGCTGAGATTGGTCAGGAGGGAAACATAAGCTATACCTAA 1809 0.4046 MYCAYIQVLDRPYRPSRSCGTSPSPLHACIMKIFAELQLLLIFAFLLHSGNGIETFKFRVPEKQLYRTSYHFQLQQNWMNDPNGPMYYKGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLNNPIEPSEPYDINSCWSGSATILPGKEQPVILYTGIDDKKHQVQNLAMPRNLSDPFLREWVKHSQNPVMTPPSGVEVDNFRDPSTAWQGEDGKWRVVIGAQNVDEGKTILYQSEDFVHWTVDPNPFYASDNTGVCECPDFFPVFINGSTNGVDTSVQNSSVRHVLKISYLRKQHDYYFLGKYVSDQENFIPDVRFTGTSSDLRYDYGKFYASKSFFDYAKSKRILWGWVNESDTTQDDIEKGWAGLQSIPRQVWLDKSGKRLVQWPIEEVEKLRDKQISITGEKLVHGSNLEVSGVTASQADVEVMFELSELENAEFLDPNGVDPQQLCSQEYASRSGIIGPFGLLALASEDLKEHTAIFFKIYRAPNRYVSLMCSDQSRSSLRLDLDKTTYGTIFDIDPNLKEISLRSLIDHSIIESFGDEGRVCITSRVYPSLAIDKDAHLYVFNYGSQSVVISNLNAWSMKQAEIGQEGNISYT 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00820 602 Pfam Glycosyl hydrolases family 32 N-terminal domain 71 391 IPR013148 -
Cca05g00820 602 SUPERFAMILY Arabinanase/levansucrase/invertase 63 392 IPR023296 -
Cca05g00820 602 SUPERFAMILY Concanavalin A-like lectins/glucanases 391 590 IPR013320 -
Cca05g00820 602 CDD GH32_Fruct1-like 77 380 - -
Cca05g00820 602 Gene3D Glycosyl hydrolase domain; family 43 75 404 IPR023296 -
Cca05g00820 602 Gene3D - 405 588 - -
Cca05g00820 602 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 61 596 - -
Cca05g00820 602 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 61 596 - -
Cca05g00820 602 Pfam Glycosyl hydrolases family 32 C terminal 394 587 IPR013189 -
Cca05g00820 602 SMART glyco_32 71 548 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00820 Cca-Chr5 22621001 22624251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00820 81 593 Glycoside Hydrolase AT1G55120 56.023 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00820 K01193 - gmx:100777487 1052.35