Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00808 ATGAGTAACGATTGGATTTGGCTACCGTCGCTGTATTCCGATCCCGACGCCTTCTCCTATTTGGATCCCTTCGTGCACCGCACTTTCGCCGGCTCGCACTTCCTGCATTCGCTCCTGGACAATTCCAGAAGCTTCGCGCTCGAGGAGGCGTTCGGACACGTGTCGCGATTCGCCGGCGCGTTGCTCATGTGGCTCTCGCGCGCGTCCGGTTCCAATGTCGCGCGCTCCTTGCGCGGTTCTCCTCCTCCTCCTACTACTTCGTTTGGTACCGTGCAGCTTAAGGCTGTGTCGTCGAATGTGCGCGTGTTCGGGTTTCCGGTAGGGCCGAAGAGGAAGTCGCGTTCGCCTCTGCGGTTGGGGAAGATTTCGAGTTTGGCGGTGCGGGTGATTTGGAGAGAGGTCGAGAGGTTTAAGTCGTTTCCCGTTCTGTCGCTCGCTGCTGCGTTGGTGCCGCCGTTTCAAAACTTGTCATCAAATGTACTAGGTAGCCCGTTGCAGAATCCTGATGTGAAAATGTATGGAGCCATTGACCAAATGTCTAAGGAGGTTGAAGGCCAAGGATGTCCGTTCCTATCGTTTATCGAGTTGAGCCAGACAAAACCTGCGGTGGAGCCTAAAACTGGCATTGAATTTCCTTTGGTTCTAGACAATATATTTGCTGGGGAGAAAAGTTACGGATTCAACTTTGAGGTCCTGGTTGGAACAGGATCCCGAACCATGACAATTGTTAAAATCAAGTCACTGAAGGTCTATGCTTTTGGATTTTATGTTCATCCATTCTCTCTCTGTGAGAAATTGGGGCCAAAATACGCATCAATTTCTGCCGATGAACTGAATAACCGTGATGACTTCTACAAGGATCTTCTCAGGGAGGATATCAATATGACTGTCAGGCTTGTTGTAAATTGCAGGGGTATGAAAATTAACAGCGTGAAAGATGCTTTTGAAAAATCACTACGAGCTAGATTAGTAAAGACAAATCCATCCACGGACTTTGATTGCCTAAGGACATTTGGTTCATTCTTCACGGAGAATATCTCCATACCTTTGGGTACAGTAATTGAGTTCAAACGAACAGTTGATGGACGTCTGATCACTAATATTAGTGGCAATCAGATAGGAAGTGTCCACAGCAAAGATTTGTGTCGGGCTTTCTTTGACATGTACATTGGAGATCTCCCCGTGTGCGAACAAACTAAAAAAGACATCGGCATGAACGTTGCGAATATTATTAGGAGCATTTCTGTATGA 1251 0.4772 MSNDWIWLPSLYSDPDAFSYLDPFVHRTFAGSHFLHSLLDNSRSFALEEAFGHVSRFAGALLMWLSRASGSNVARSLRGSPPPPTTSFGTVQLKAVSSNVRVFGFPVGPKRKSRSPLRLGKISSLAVRVIWREVERFKSFPVLSLAAALVPPFQNLSSNVLGSPLQNPDVKMYGAIDQMSKEVEGQGCPFLSFIELSQTKPAVEPKTGIEFPLVLDNIFAGEKSYGFNFEVLVGTGSRTMTIVKIKSLKVYAFGFYVHPFSLCEKLGPKYASISADELNNRDDFYKDLLREDINMTVRLVVNCRGMKINSVKDAFEKSLRARLVKTNPSTDFDCLRTFGSFFTENISIPLGTVIEFKRTVDGRLITNISGNQIGSVHSKDLCRAFFDMYIGDLPVCEQTKKDIGMNVANIIRSISV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00808 416 PANTHER FATTY-ACID-BINDING PROTEIN 2 39 413 - -
Cca05g00808 416 SUPERFAMILY Chalcone isomerase 205 411 IPR036298 GO:0016872
Cca05g00808 416 PANTHER FATTY-ACID-BINDING PROTEIN 2 39 413 - -
Cca05g00808 416 Gene3D - 261 403 IPR016089 -
Cca05g00808 416 Pfam Chalcone isomerase like 232 403 IPR016087 GO:0016872
Cca05g00808 416 Gene3D - 203 389 IPR016088 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00808 - - gmx:100803025 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00808 05 22409698 22416797 Cca05g00808 05 22409698 22416797 ECH