Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00784 ATGATGAAATCCATGTTTGAGTGTGGAAGCCAAGGTGCTAATGTTGAAGAAGGAGAAATTCATTGGAATAGTGGTCAGCTACTACTGCAAGACATTCAAGAAATAAGCAAAGCCCTTTACTTGAACAATACCCCTTCTAGGCCTTCCTATTCCTCGGTCCATAATCGATCCAAGTCTGCTGGTAAAGCCCGTTTGTCAGAGCCTCAAGTTGCCTTCACCACAGGATTTCGAAACGAAGATCTGTTGCCTAAGGACAAGAAATTGTCTTCTGTATGGAATTGGAAGAAGCCATTGAAAGCTTTGACCCATATTGGTGATCAAAAGTTTAAATGTTGCTTTAATCTTCATGTCCACTCAATTGAGGGTCTGCCTTTGAATTTTGATGGTGTTAGGTTGAGTGTGCATTGGAAAAGGAAAAGCAACATTTTGCAAACACACCCATCAAGGGTTTTCCAGGGTGTTGCCGAGTTCAATGAAACTTTGAGTCACGGATGTTCTGTTTATGTTAGCCGCGCTGTGTCTGGTCACTCTGTCAAGTATGAGTCCAAGATATTCTTGATTTATGCCTCTATCGTAGGGGCACCTGAACATGAGATAGGGAACCATCAGGTTGATCTCACAAGGCTTTTACCTCTGACTTTAGCAGAGTTAGGGGGTAATAGAAGTTCAGGGAAATGGACCACAAGTTTTAGGTTGGCAGGAAAAGCTGTAGGAGCTAGCCTAAATGTTAGTTTCAGCTATCAAGTAATGAAGGGTGAGTTAATGGAATTTGGTGGCAATAATTTAAATGTTCTCAACCTTGTTAATTTGAAGCCAGGCAGGCCAAGCAGTACAAGCAGTGTTATGGATTTTAGTCCTAACCCTTTTCATTCTGATGATGTGAATTTATCCCATGAAGCATTGATGAGTTCTGGCCCAAGTCTTTCCAAATCAATCAGTTTCCTATATCAAAAACTTGATGAGGGGAACTTCAATAATTTAGCACAGGAAGACTTGGAACAGTTGGGACCACTTAAATCCCATGTTGTGGAATCAGAGTCACCTCAAGAATCAAATCAACATGAACCTGATGACACTGAATTTTCCTTTATCCCACAAGTAGAAACATTGGGAGGGGATTCCTTAAAACTTGATCAGACAGGAAATGAAACAGTTGATTTTTCAACAGTTGAAATCATTAATGTGGATGATATTATAAAAGATGATGATGTATTTGTTGACAAGAATTCAGGATGTGATTCAATGGATAACATATGTACTAGTTGTGTAGATGGGACTACCGCAGATGACAGCAAACTCAAATGCAGTAGTTCATGCGTCAGTATAACTTGCATCAAGGCTGCAGATATACTTCCTGAGACATCTAAGTTTCTTGACCAAGAAAAGTGCCTTAATGTTAAATCAAATTATAAAGCGCATAGAACGGAAAAAAAATCAAGTAGCTTGGATTTTATCACTGAATCTATAGCAAATGATTTCTTAAACATGCTGGCCATGGAGAGCGGTTCATTTCGCTCAAGTTGTGATGGTGACCCCCAGTCTCCCAGAGAGAAGCTTTTAAGACAGTTTGAAAAAGAGGGTAACCTCACCTTTGAATTTGATGCAAATGAAGAGGAATTAAGGACAGGTACACTTGGACATAGCTGTTGGGATTTTACTGTCAATTCTGATTTGTCTTTATTTATCCAAGCTGCTGAAGAGGAGCATGCGAGGGAGAATCAGTCATTAATGCAGAGAAGAAAGGCCAAAATTCTTGAAGACATGGAGACTGACTCATTGATGCGACTGTGGGGTTTAAATGAGAGGGACTTCGAAAATTCTCTGGAAACTTATTCTGGTGGATTTGGAAGTCCAATTGAGCTACCCAATGAAGAATCATCCATATTACCCTCAATTGGACAGGGGCTTGGTTCATTTGTTCAAATTGTGGGTGGAGGCTTTTTGAGGTCCATGAGTCCATCCCTGTTCAGGAATGCTAAGAATTGTGGGAACCTCATCACTCAGGCTTCTAATCCAGTTGTTCTACCTGCAAAAATGGGTAATGATATATTGGAGATACTGCTGCATGTGGCATCTGATGGAGTTGAAGAGCTGTGTGAACATGTCTATAAATTAATGCCTTTGCAAGATATCACTGGAAAATCCATTGAACGTATTGTGTTGGAAGCCACAGCTGACAAAGGGGCTCCTGGAAGGCAGGGGTCCAGGCATCATGATTTGTATGAAGAATTTCCATGTGATTATTTAACAGATGAAGGGATGAGCTTGGATAGTGTGTCTCTTGAAACTATAGCTACTATGACAGTTGATAAGATCGAAGCCCTTTTAATAGAAGGATTGAGAATACAGTCTGGCATCTTGTATGAGGAGGCACCATCATATATCCGTCCCCAACATGCAAAGACCCCTGCAGTAGGAAGCAGAAGAGCCAACTGGAGGGGGTTTCCCACATCAGAAAGAGTTGCTAAATTGCACCTAGAAGATGGTGGAGAAATTGGCAATGATGATGATGGATTAATGGGGCTGTCAATAACATTAGATCAGTGGTTGAGATTGGATTCTGGCATTATTGAAGGAGATCAGAATTCAGAACAAGTTTTGAAGATCCTTAAAGCACACCATTCTAAAATCAGAGAGTTTGATGATGGAGGGTTGAAAAATGCCATGGAGCAGGTAAAAACATACAGCAGAAAGCACGGACTCTTGGGAGACCACCTAACGGTGGCTTTTATGATCCAGCTTAGAGATCCTCTACGAAATTATGAGCCAGTTGGTGTTCCAATGCTGGTTTTGACTCAGGTGGAAAGAGTTTGCTTGCATATAATGATGCCGCAAGACAGCAGCAATTTTCTTAATAAAAAGGAAAGTGGAATGGAGAATGAGGCCCTGCTAAATGAGACAAGTAGCAAGAGTGTGGAAGATATGAGTACCGATAACGAAGCTCTTCAATATAGATTTAAACTCAAAGAGATTCATCTTTCAAGTGTCCTTACCAAAGCTGGAAGAAGGCAACATTGGGGTACTGCAGCACAGCAACAGTCTGGGATCCGTTGGTTGGTTGCCAGTGGCATGACTAGTACTGTCAAACATTCATCTTCAACATCAAAGGCAATTGTATTATCATCCCCATTGTTTACCAATAAGTTGCTGAATGAGGATATCCTGTGGAGTATTTCTTATATTTGTAGTGTCATGGGGACTCATAGTAAAGAGCAGCCAGCTGAAAATGTACACATTCGGAACCCTGATATCATCTTCCCAAGTTAA 3267 0.4083 MMKSMFECGSQGANVEEGEIHWNSGQLLLQDIQEISKALYLNNTPSRPSYSSVHNRSKSAGKARLSEPQVAFTTGFRNEDLLPKDKKLSSVWNWKKPLKALTHIGDQKFKCCFNLHVHSIEGLPLNFDGVRLSVHWKRKSNILQTHPSRVFQGVAEFNETLSHGCSVYVSRAVSGHSVKYESKIFLIYASIVGAPEHEIGNHQVDLTRLLPLTLAELGGNRSSGKWTTSFRLAGKAVGASLNVSFSYQVMKGELMEFGGNNLNVLNLVNLKPGRPSSTSSVMDFSPNPFHSDDVNLSHEALMSSGPSLSKSISFLYQKLDEGNFNNLAQEDLEQLGPLKSHVVESESPQESNQHEPDDTEFSFIPQVETLGGDSLKLDQTGNETVDFSTVEIINVDDIIKDDDVFVDKNSGCDSMDNICTSCVDGTTADDSKLKCSSSCVSITCIKAADILPETSKFLDQEKCLNVKSNYKAHRTEKKSSSLDFITESIANDFLNMLAMESGSFRSSCDGDPQSPREKLLRQFEKEGNLTFEFDANEEELRTGTLGHSCWDFTVNSDLSLFIQAAEEEHARENQSLMQRRKAKILEDMETDSLMRLWGLNERDFENSLETYSGGFGSPIELPNEESSILPSIGQGLGSFVQIVGGGFLRSMSPSLFRNAKNCGNLITQASNPVVLPAKMGNDILEILLHVASDGVEELCEHVYKLMPLQDITGKSIERIVLEATADKGAPGRQGSRHHDLYEEFPCDYLTDEGMSLDSVSLETIATMTVDKIEALLIEGLRIQSGILYEEAPSYIRPQHAKTPAVGSRRANWRGFPTSERVAKLHLEDGGEIGNDDDGLMGLSITLDQWLRLDSGIIEGDQNSEQVLKILKAHHSKIREFDDGGLKNAMEQVKTYSRKHGLLGDHLTVAFMIQLRDPLRNYEPVGVPMLVLTQVERVCLHIMMPQDSSNFLNKKESGMENEALLNETSSKSVEDMSTDNEALQYRFKLKEIHLSSVLTKAGRRQHWGTAAQQQSGIRWLVASGMTSTVKHSSSTSKAIVLSSPLFTNKLLNEDILWSISYICSVMGTHSKEQPAENVHIRNPDIIFPS 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00784 1088 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 17 1088 IPR039823 -
Cca05g00784 1088 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 107 252 IPR019448 -
Cca05g00784 1088 MobiDBLite consensus disorder prediction 47 66 - -
Cca05g00784 1088 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 17 1088 IPR039614 -
Cca05g00784 1088 ProSiteProfiles C2 NT-type domain profile. 101 249 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00784 Cca-Chr5 21739254 21743377 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00784 - - gmx:102659940 1693.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00784 05 21739254 21743377 Cca05g00784 05 21739254 21743377 ECH